RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SP2Q02086 613 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 PPIGQ13427 754 aaKnown RBP eCLIP10.38□□□□□ -0.759e-6■■□□□ 12.8
HDAC3-211ENST00000491581 ADGRE1Q14246 886 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 GRM4Q14833 912 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 GPNMBQ14956 572 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 CCDC85BQ15834 202 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-211ENST00000491581 GDF6Q6KF10 455 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-211ENST00000491581 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 TMEM199Q8N511 208 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 DHX38Q92620 1227 aaKnown RBP10.38□□□□□ -0.75
HDAC3-211ENST00000491581 TIFAQ96CG3 184 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 TCEANC2Q96MN5 208 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 MTG1Q9BT17 334 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-211ENST00000491581 ZNF576Q9H609 170 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 PXMP2Q9NR77 195 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
HDAC3-211ENST00000491581 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-211ENST00000491581 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-211ENST00000491581 A6NJR5 290 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 PLEKHA8P1O95397 391 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 TROAPQ12815 778 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 TMEM67Q5HYA8 995 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 ARHGEF16Q5VV41 709 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 KRT40Q6A162 431 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 TICAM2Q86XR7 235 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 MB21D2Q8IYB1 491 aaPredicted RBP10.37□□□□□ -0.75
HDAC3-211ENST00000491581 DNERQ8NFT8 737 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 IGDCC4Q8TDY8 1250 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 SCFD2Q8WU76 684 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 MTMR8Q96EF0 704 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 ALG1Q9BT22 464 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 LSG1Q9H089 658 aaKnown RBP10.37□□□□□ -0.75
HDAC3-211ENST00000491581 DDX41Q9UJV9 622 aaKnown RBP10.37□□□□□ -0.75
HDAC3-211ENST00000491581 Q9Y3F1 56 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 PCDHA1Q9Y5I3 950 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 SIP14410 1827 aa10.37□□□□□ -0.75
HDAC3-211ENST00000491581 EPOPA6NHQ4 379 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 ZBBXA8MT70 800 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 ZEB2O60315 1214 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 FGBP02675 491 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 NR3C2P08235 984 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 CPT1AP50416 773 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 HSD17B4P51659 736 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 WTAPQ15007 396 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 HSDL1Q3SXM5 330 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 HERVK_113Q902F9 699 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 PDCD2LQ9BRP1 358 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 AMNQ9BXJ7 453 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 CNNM2Q9H8M5 875 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 POLR3EQ9NVU0 708 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 RTEL1Q9NZ71 1219 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 CHD9Q3L8U1 2897 aa10.36□□□□□ -0.75
HDAC3-211ENST00000491581 RAD50Q92878 1312 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 ZBTB5O15062 677 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 CABYRO75952 493 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 MRPS9P82933 396 aaKnown RBP10.35□□□□□ -0.75
HDAC3-211ENST00000491581 PGM5Q15124 567 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 STXBP2Q15833 593 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 PSRC1Q6PGN9 363 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-211ENST00000491581 USP17L6PQ6QN14 398 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 CCDC82Q8N4S0 544 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 NCOA7Q8NI08 942 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 NSUN6Q8TEA1 469 aaKnown RBP10.35□□□□□ -0.75
HDAC3-211ENST00000491581 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 HDAC6Q9UBN7 1215 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
HDAC3-211ENST00000491581 MRVI1Q9Y6F6 885 aa10.35□□□□□ -0.75
HDAC3-211ENST00000491581 LCHNA4D1U4 455 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 SLC27A2O14975 620 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 ADAMTS3O15072 1205 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 PRC1O43663 620 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 GH1P01241 217 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 IQCF3P0C7M6 154 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 CPA1P15085 419 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 DEFB103AP81534 67 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 SP4Q02446 784 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 PTGISQ16647 500 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 RALYLQ86SE5 291 aaKnown RBP10.34□□□□□ -0.75
HDAC3-211ENST00000491581 TRIM50Q86XT4 487 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 SRBD1Q8N5C6 995 aaKnown RBP10.34□□□□□ -0.75
HDAC3-211ENST00000491581 ESYT1Q9BSJ8 1104 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 VCANP13611 3396 aa10.34□□□□□ -0.75
HDAC3-211ENST00000491581 GGPS1O95749 300 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 CA3P07451 260 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 UBA1P22314 1058 aaKnown RBP10.33□□□□□ -0.76
HDAC3-211ENST00000491581 IGFBP4P22692 258 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 PSEN2P49810 448 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 TRDNQ13061 729 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 MBTPS1Q14703 1052 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 UBE2SQ16763 222 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 MYSM1Q5VVJ2 828 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
HDAC3-211ENST00000491581 MCF2L2Q86YR7 1114 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms