RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ST6GALNAC2Q9UJ37 374 aa6.98□□□□□ -1.29
PHC3-213ENST00000491258 EMC9Q9Y3B6 208 aa6.98□□□□□ -1.29
PHC3-213ENST00000491258 C1QTNF3-AMACRE9PGA6 284 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 ITGA1P56199 1179 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 INF2Q27J81 1249 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 POMZP3Q6PJE2 187 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 LIMS2Q7Z4I7 341 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 MILR1Q7Z6M3 343 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 CPLX3Q8WVH0 158 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 APBA2Q99767 749 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 C1QTNF3Q9BXJ4 246 aa6.97□□□□□ -1.29
PHC3-213ENST00000491258 NOP56O00567 594 aaKnown RBP6.96□□□□□ -1.3
PHC3-213ENST00000491258 FPR2P25090 351 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 STAT5AP42229 794 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 PRAMEF18Q5VWM3 479 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 GTF2IRD2BQ6EKJ0 949 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 GTF2IRD2Q86UP8 949 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 FAM126BQ8IXS8 530 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 SLC16A11Q8NCK7 471 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 BVESQ8NE79 360 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 LCORQ96JN0 433 aaPredicted RBP6.96□□□□□ -1.3
PHC3-213ENST00000491258 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.3
PHC3-213ENST00000491258 NAT2P11245 290 aa6.95□□□□□ -1.3
PHC3-213ENST00000491258 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
PHC3-213ENST00000491258 RPL11P62913 178 aaKnown RBP6.95□□□□□ -1.3
PHC3-213ENST00000491258 DVL3Q92997 716 aaPredicted RBP6.95□□□□□ -1.3
PHC3-213ENST00000491258 SHDQ96IW2 340 aa6.95□□□□□ -1.3
PHC3-213ENST00000491258 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
PHC3-213ENST00000491258 SLC6A11P48066 632 aa6.94□□□□□ -1.3
PHC3-213ENST00000491258 PRR31Q5SQ13 230 aa6.94□□□□□ -1.3
PHC3-213ENST00000491258 RASGRP4Q8TDF6 673 aa6.94□□□□□ -1.3
PHC3-213ENST00000491258 LGR4Q9BXB1 951 aa6.94□□□□□ -1.3
PHC3-213ENST00000491258 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 RECKO95980 971 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 CYP1A1P04798 512 aaPredicted RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 CASP7P55210 303 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 MROH9Q5TGP6 573 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 CEP68Q76N32 757 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 TRIM59Q8IWR1 403 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 SH3RF3Q8TEJ3 882 aaPredicted RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 KISS1RQ969F8 398 aaPredicted RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 TRMT2BQ96GJ1 504 aaKnown RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 ZSWIM3Q96MP5 696 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 SSBP3Q9BWW4 388 aaPredicted RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 NGRNQ9NPE2 291 aaKnown RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 CYP26B1Q9NR63 512 aa6.93□□□□□ -1.3
PHC3-213ENST00000491258 TIMM13Q9Y5L4 95 aaPredicted RBP6.93□□□□□ -1.3
PHC3-213ENST00000491258 C6P13671 934 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 NKX3-2P78367 333 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 ADAM9Q13443 819 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 SURF1Q15526 300 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 IQCEQ6IPM2 695 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 SPRED1Q7Z699 444 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 PLEKHH3Q7Z736 793 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 RIOX2Q8IUF8 465 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 FRS2Q8WU20 508 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 NKX2-4Q9H2Z4 354 aa6.92□□□□□ -1.3
PHC3-213ENST00000491258 SUV39H1O43463 412 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 B4GALT3O60512 393 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 ZNF28P17035 718 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 BCL6P41182 706 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 ZNF143P52747 638 aaPredicted RBP6.91□□□□□ -1.3
PHC3-213ENST00000491258 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 METTL16Q86W50 562 aaKnown RBP6.91□□□□□ -1.3
PHC3-213ENST00000491258 FAM169BQ8N8A8 192 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 DIO2Q92813 273 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 L2HGDHQ9H9P8 463 aa6.91□□□□□ -1.3
PHC3-213ENST00000491258 COA3Q9Y2R0 106 aaPredicted RBP6.91□□□□□ -1.3
PHC3-213ENST00000491258 NPEPPSL1A6NEC2 478 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 C9orf118A6NHY6 69 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 MYO1BO43795 1136 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 CYP4F3Q08477 520 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 NLRP10Q86W26 655 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 BTN2A2Q8WVV5 523 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 TMEM169Q96HH4 297 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 MRGPRX3Q96LB0 322 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.3
PHC3-213ENST00000491258 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.9□□□□□ -1.3
PHC3-213ENST00000491258 X6R8D5 127 aa6.9□□□□□ -1.3
PHC3-213ENST00000491258 MEFVO15553 781 aaPredicted RBP6.89□□□□□ -1.31
PHC3-213ENST00000491258 TACR2P21452 398 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 ECI1P42126 302 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 GTF2A2P52657 109 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 KRTAP1-1Q07627 177 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 ICAM4Q14773 271 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 NCAPHQ15003 741 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 E4F1Q66K89 784 aaPredicted RBP6.89□□□□□ -1.31
PHC3-213ENST00000491258 ANAPC16Q96DE5 110 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 CLIC6Q96NY7 704 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 TMEM168Q9H0V1 697 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 TMEFF2Q9UIK5 374 aaPredicted RBP6.89□□□□□ -1.31
PHC3-213ENST00000491258 CROTQ9UKG9 612 aa6.89□□□□□ -1.31
PHC3-213ENST00000491258 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
PHC3-213ENST00000491258 IL13P35225 146 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 GDF5P43026 501 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 GJA8P48165 433 aa6.88□□□□□ -1.31
PHC3-213ENST00000491258 NT5DC4Q86YG4 428 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms