RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
SMPD4-219ENST00000491128 SARSP49591 514 aaKnown RBP15.67■□□□□ 0.1
SMPD4-219ENST00000491128 HSD17B4P51659 736 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 PPATQ06203 517 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 MCM6Q14566 821 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 RNF207Q6ZRF8 634 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 PLA2G4DQ86XP0 818 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
SMPD4-219ENST00000491128 HPS3Q969F9 1004 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 WDR11Q9BZH6 1224 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 CCDC39Q9UFE4 941 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 HOOK1Q9UJC3 728 aaKnown RBP15.67■□□□□ 0.1
SMPD4-219ENST00000491128 CYP3A7-CYP3A51PA0A087WV96 503 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 SPDYE5A6NIY4 337 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 ITGB5P18084 799 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 CYP3A7P24462 503 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 STX17P56962 302 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 SH3D19Q5HYK7 790 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 TRMT1LQ7Z2T5 733 aaKnown RBP15.67■□□□□ 0.1
SMPD4-219ENST00000491128 SLC10A4Q96EP9 437 aa15.67■□□□□ 0.1
SMPD4-219ENST00000491128 POTEB3A0JP26 581 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 GOLGA6L19H0YKK7 550 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 SORBS3O60504 671 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 CELF2O95319 508 aaKnown RBP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 SSBP05455 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 RAD51AP2Q09MP3 1159 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 KANK3Q6NY19 840 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 POTEBQ6S5H4 581 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 AK8Q96MA6 479 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 A0A0G2JLL6 359 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 E9PMD0 336 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 EML1O00423 815 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 TRAF1Q13077 416 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 PTPN21Q16825 1174 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 KRT79Q5XKE5 535 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 DYMQ7RTS9 669 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 PRRT2Q7Z6L0 340 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-219ENST00000491128 SPC24Q8NBT2 197 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 PHIPQ8WWQ0 1821 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 CALML4Q96GE6 196 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 CDK5RAP3Q96JB5 506 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 RMDN3Q96TC7 470 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 BLOC1S4Q9NUP1 217 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 HOXC10Q9NYD6 342 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 KIAA1024Q9UPX6 916 aa15.66■□□□□ 0.1
SMPD4-219ENST00000491128 POTEFA5A3E0 1075 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 MED24O75448 989 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 CYP2C8P10632 490 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 IRX3P78415 501 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-219ENST00000491128 MRPS9P82933 396 aaKnown RBP15.65■□□□□ 0.1
SMPD4-219ENST00000491128 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-219ENST00000491128 MORC3Q14149 939 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 Q4G0T1 1027 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 CEP55Q53EZ4 464 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 POTEGQ6S5H5 508 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-219ENST00000491128 TXNRD2Q9NNW7 524 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 RGL1Q9NZL6 768 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 ADAMTS5Q9UNA0 930 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 GDAQ9Y2T3 454 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 SPIRE1Q08AE8 756 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 SPATA20Q8TB22 786 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 MED15Q96RN5 788 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 TEX13BQ9BXU2 312 aa15.65■□□□□ 0.1
SMPD4-219ENST00000491128 OTOFQ9HC10 1997 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 ATP1A3P13637 1013 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 CIITAP33076 1130 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 PSMC6P62333 389 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 FSTL1Q12841 308 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 ORC2Q13416 577 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-219ENST00000491128 NT5DC1Q5TFE4 455 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 MCF2L2Q86YR7 1114 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 A1CFQ9NQ94 594 aaKnown RBP15.64■□□□□ 0.09
SMPD4-219ENST00000491128 ZBTB39O15060 712 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 SMC2O95347 1197 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 CYP3A4P08684 503 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 CNTN2Q02246 1040 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 MOGSQ13724 837 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 PDIA5Q14554 519 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 UVSSAQ2YD98 709 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 Q3C1V9 767 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 LDLRAD1Q5T700 205 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 ARHGEF16Q5VV41 709 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 ZNF577Q9BSK1 485 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 TRIM5Q9C035 493 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 NAT10Q9H0A0 1025 aaKnown RBP15.64■□□□□ 0.09
SMPD4-219ENST00000491128 BCAS3Q9H6U6 928 aa15.64■□□□□ 0.09
SMPD4-219ENST00000491128 NPHP3-ACAD11A0A0J9YXS1 232 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 TESPA1A2RU30 521 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-219ENST00000491128 SOCS7O14512 581 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 RPN1P04843 607 aaKnown RBP15.63■□□□□ 0.09
SMPD4-219ENST00000491128 CCDC173Q0VFZ6 552 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 NCAPHQ15003 741 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms