RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 USP11P51784 963 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 BECN1Q14457 450 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 JAKMIP3Q5VZ66 844 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 TAPT1Q6NXT6 567 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 CDHR1Q96JP9 859 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 RNF208Q9H0X6 261 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 UNC93B1Q9H1C4 597 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 DDX20Q9UHI6 824 aaKnown RBP18.08■□□□□ 0.48
TRA2A-208ENST00000490942 ZHX1Q9UKY1 873 aaPredicted RBP18.08■□□□□ 0.48
TRA2A-208ENST00000490942 Q9Y3F1 56 aa18.08■□□□□ 0.48
TRA2A-208ENST00000490942 LRRC37A2A6NM11 1700 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 CCND3P30281 292 aaPredicted RBP18.07■□□□□ 0.48
TRA2A-208ENST00000490942 MRPS9P82933 396 aaKnown RBP18.07■□□□□ 0.48
TRA2A-208ENST00000490942 TTLL4Q14679 1199 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 MOXD1Q6UVY6 613 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 NIPA1Q7RTP0 329 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 GPRASP2Q96D09 838 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 TMEM106CQ9BVX2 250 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 FOXP1Q9H334 677 aaPredicted RBP18.07■□□□□ 0.48
TRA2A-208ENST00000490942 TMEM260Q9NX78 707 aa18.07■□□□□ 0.48
TRA2A-208ENST00000490942 CCDC194A0A1B0GVG4 234 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 DUSP11O75319 330 aaKnown RBP18.06■□□□□ 0.48
TRA2A-208ENST00000490942 MYCLP12524 364 aaPredicted RBP18.06■□□□□ 0.48
TRA2A-208ENST00000490942 CIITAP33076 1130 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 NKX3-2P78367 333 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 ARHGAP4P98171 946 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.483e-11■□□□□ 10.5
TRA2A-208ENST00000490942 MTFR1Q15390 333 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 CCDC144BQ3MJ40 725 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 DUSP28Q4G0W2 176 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 PRAMEF19Q5SWL8 479 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 NLRX1Q86UT6 975 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 FBXO16Q8IX29 292 aaPredicted RBP18.06■□□□□ 0.48
TRA2A-208ENST00000490942 DIS3L2Q8IYB7 885 aaKnown RBP18.06■□□□□ 0.48
TRA2A-208ENST00000490942 IL31RAQ8NI17 732 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 TNFRSF25Q93038 417 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 NAP1L4Q99733 375 aaKnown RBP18.06■□□□□ 0.48
TRA2A-208ENST00000490942 CRISPLD2Q9H0B8 497 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 GJB4Q9NTQ9 266 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 UBIAD1Q9Y5Z9 338 aa18.06■□□□□ 0.48
TRA2A-208ENST00000490942 FIBPO43427 364 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 RARBP10826 455 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
TRA2A-208ENST00000490942 GJA8P48165 433 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 CEP55Q53EZ4 464 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 LARP1BQ659C4 914 aaKnown RBP18.05■□□□□ 0.48
TRA2A-208ENST00000490942 LHX8Q68G74 356 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 CCDC62Q6P9F0 684 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 RASGRP4Q8TDF6 673 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 HTTP42858 3142 aa18.05■□□□□ 0.48
TRA2A-208ENST00000490942 BTBD18B2RXH4 712 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 SPATA31C2B4DYI2 1134 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 ADAMTS3O15072 1205 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 DTNBO60941 627 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 RGS20O76081 388 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 SGPL1O95470 568 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
TRA2A-208ENST00000490942 U2AF2P26368 475 aaKnown RBP eCLIP18.04■□□□□ 0.487e-8■■□□□ 12.5
TRA2A-208ENST00000490942 CNGA1P29973 690 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 TNFAIP2Q03169 654 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 EEPD1Q7L9B9 569 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 ANKLE1Q8NAG6 615 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 GIMAP8Q8ND71 665 aaPredicted RBP18.04■□□□□ 0.48
TRA2A-208ENST00000490942 SENP7Q9BQF6 1050 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 MXRA8Q9BRK3 442 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 WDR11Q9BZH6 1224 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 JADE2Q9NQC1 790 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 OGDHLQ9ULD0 1010 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 GNEQ9Y223 722 aaKnown RBP18.04■□□□□ 0.48
TRA2A-208ENST00000490942 MCM3APO60318 1980 aa18.04■□□□□ 0.48
TRA2A-208ENST00000490942 CYP3A7-CYP3A51PA0A087WV96 503 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 H3BQV1 296 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 MEIS1O00470 390 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
TRA2A-208ENST00000490942 ITGB5P18084 799 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 CYP3A7P24462 503 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 ADCYAP1R1P41586 468 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
TRA2A-208ENST00000490942 IFFO2Q5TF58 517 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 TBCKQ8TEA7 893 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 U2AF1L4Q8WU68 220 aaKnown RBP18.03■□□□□ 0.48
TRA2A-208ENST00000490942 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
TRA2A-208ENST00000490942 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 DEFB118Q96PH6 123 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 UPF3AQ9H1J1 476 aaKnown RBP18.03■□□□□ 0.48
TRA2A-208ENST00000490942 PDGFCQ9NRA1 345 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 DDX41Q9UJV9 622 aaKnown RBP18.03■□□□□ 0.48
TRA2A-208ENST00000490942 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
TRA2A-208ENST00000490942 TXNP10599 105 aaKnown RBP18.02■□□□□ 0.48
TRA2A-208ENST00000490942 SMPD1P17405 629 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 CST5P28325 142 aaPredicted RBP18.02■□□□□ 0.48
TRA2A-208ENST00000490942 TRAPPC10P48553 1259 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 NR5A1Q13285 461 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 ORC2Q13416 577 aaPredicted RBP18.02■□□□□ 0.48
TRA2A-208ENST00000490942 MTMR1Q13613 665 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 NEDD9Q14511 834 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 PPP4R3AQ6IN85 833 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 SEPT14Q6ZU15 432 aa18.02■□□□□ 0.48
TRA2A-208ENST00000490942 NEK8Q86SG6 692 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms