RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 EIF3JO75822 258 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 KCNA2P16389 499 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 ITGB5P18084 799 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 NSUN6Q8TEA1 469 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 NLRC5Q86WI3 1866 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 A0A1W2PPC1 479 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 TFRCP02786 760 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 C16orf70Q9BSU1 422 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 ADD3Q9UEY8 706 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 PDE4DIPQ5VU43 2346 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 ZBTB43O43298 467 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 PGK1P00558 417 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 CIITAP33076 1130 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 SREBF1P36956 1147 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 BRF1Q92994 677 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 SEZ6LQ9BYH1 1024 aa10.63□□□□□ -0.71
SUPT20H-220ENST00000490716 KLF18A0A0U1RQI7 1052 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 NR3C2P08235 984 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 BLOC1S2Q6QNY1 142 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 SMARCC2Q8TAQ2 1214 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 TGFB3P10600 412 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 TNFAIP2Q03169 654 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 NIPA1Q7RTP0 329 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 TLK2Q86UE8 772 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 PPTC7Q8NI37 304 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 DDX11Q96FC9 970 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 CYP3A7-CYP3A51PA0A087WV96 503 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 ERICH2A1L162 156 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 RARBP10826 455 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 CYP3A7P24462 503 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 PSMA5P28066 241 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 RRP36Q96EU6 259 aaKnown RBP10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 SENP7Q9BQF6 1050 aa10.62□□□□□ -0.71
SUPT20H-220ENST00000490716 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 ASGR1P07306 291 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 MMP3P08254 477 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 AK2P54819 239 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 ME3Q16798 604 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 RTN1Q16799 776 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 CELF3Q5SZQ8 465 aaKnown RBP10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 C16orf59Q7L2K0 433 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 CHMP4CQ96CF2 233 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 RMDN3Q96TC7 470 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 PHF20Q9BVI0 1012 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 WDR11Q9BZH6 1224 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 F2P00734 622 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 HOXA13P31271 388 aaPredicted RBP10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 USP17L6PQ6QN14 398 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 COPS5Q92905 334 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 NEFLP07196 543 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 PCYT2Q99447 389 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 TET1Q8NFU7 2136 aa10.61□□□□□ -0.71
SUPT20H-220ENST00000490716 NFASCO94856 1347 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 LGR5O75473 907 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 UBA1P22314 1058 aaKnown RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 CEP89Q96ST8 783 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 MEIS1O00470 390 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 RAD21O60216 631 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 SCG2P13521 617 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 PTPN11Q06124 597 aaPredicted RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 LY6KQ17RY6 165 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 NSMFQ6X4W1 530 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 MICU3Q86XE3 530 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 SCFD2Q8WU76 684 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 GTF3C6Q969F1 213 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 CNPY2Q9Y2B0 182 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 GCOM1H8Y6P7 765 aaPredicted RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 ARVCFO00192 962 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 CD2BP2O95400 341 aaKnown RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 POLR2MP0CAP2 368 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 CALML3P27482 149 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 RTP1P59025 263 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 TRAF1Q13077 416 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 FSCN1Q16658 493 aaKnown RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 TBC1D32Q96NH3 1257 aa10.6□□□□□ -0.71
SUPT20H-220ENST00000490716 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 TRIM60Q495X7 471 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 NCOA5Q9HCD5 579 aaKnown RBP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 JADE2Q9NQC1 790 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 FNDC1Q4ZHG4 1894 aaPredicted RBP10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 ATP9AO75110 1047 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 STXBP2Q15833 593 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 NFRKBQ6P4R8 1299 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 RAB11FIP4Q86YS3 637 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 GPRASP2Q96D09 838 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 GPR20Q99678 358 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 VAT1LQ9HCJ6 419 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 CYP46A1Q9Y6A2 500 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 hCG_1642624A0A1W2PR95 340 aa10.59□□□□□ -0.71
SUPT20H-220ENST00000490716 FAM86B1E9PN63 330 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms