RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 ASGR1P07306 291 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 TXNP10599 105 aaKnown RBP17.7■□□□□ 0.42
VPS26A-207ENST00000490696 RTP1P59025 263 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 TTLL4Q14679 1199 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
VPS26A-207ENST00000490696 PPP1R18Q6NYC8 613 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 ZNF713Q8N859 430 aaPredicted RBP17.7■□□□□ 0.42
VPS26A-207ENST00000490696 BARHL2Q9NY43 387 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 KIAA1217Q5T5P2 1943 aa17.7■□□□□ 0.42
VPS26A-207ENST00000490696 MYCLP12524 364 aaPredicted RBP17.69■□□□□ 0.42
VPS26A-207ENST00000490696 SCG2P13521 617 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 IFNAR1P17181 557 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 CCND2P30279 289 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 FXR1P51114 621 aaKnown RBP eCLIP17.69■□□□□ 0.42
VPS26A-207ENST00000490696 NAPAP54920 295 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 PKN1Q16512 942 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 COPS5Q92905 334 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 PHKBQ93100 1093 aa17.69■□□□□ 0.42
VPS26A-207ENST00000490696 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
VPS26A-207ENST00000490696 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
VPS26A-207ENST00000490696 UBE2SQ16763 222 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 TEX2Q8IWB9 1127 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 OR6J1Q8NGC5 347 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 RNF26Q9BY78 433 aaPredicted RBP17.68■□□□□ 0.42
VPS26A-207ENST00000490696 RIC8AQ9NPQ8 531 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 STARD7Q9NQZ5 370 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 DDX41Q9UJV9 622 aaKnown RBP17.68■□□□□ 0.42
VPS26A-207ENST00000490696 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 ELP1O95163 1332 aa17.68■□□□□ 0.42
VPS26A-207ENST00000490696 ZEB2O60315 1214 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 PPFIA3O75145 1194 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 AK2P54819 239 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 CXCL17Q6UXB2 119 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
VPS26A-207ENST00000490696 GLT1D1Q96MS3 346 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 ZMYND8Q9ULU4 1186 aaPredicted RBP17.67■□□□□ 0.42
VPS26A-207ENST00000490696 ATP11BQ9Y2G3 1177 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 MRVI1Q9Y6F6 885 aa17.67■□□□□ 0.42
VPS26A-207ENST00000490696 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 A6NJR5 290 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 STAM2O75886 525 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 CPT1AP50416 773 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 ADCY7P51828 1080 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 ARHGAP1Q07960 439 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 STK3Q13188 491 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 XRRA1Q6P2D8 792 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 INPP4AQ96PE3 977 aaPredicted RBP17.66■□□□□ 0.42
VPS26A-207ENST00000490696 SLC26A6Q9BXS9 759 aa17.66■□□□□ 0.42
VPS26A-207ENST00000490696 ESYT2A0FGR8 921 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 SPDYE3A6NKU9 549 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 PFKFB2O60825 505 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 CABYRO75952 493 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 GH1P01241 217 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 SYN1P17600 705 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 NEK4P51957 841 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
VPS26A-207ENST00000490696 TLE2Q04725 743 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 SCRN1Q12765 414 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 KCNV1Q6PIU1 500 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 EMID1Q96A84 441 aaPredicted RBP17.65■□□□□ 0.42
VPS26A-207ENST00000490696 ZMYND12Q9H0C1 365 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 GLT8D2Q9H1C3 349 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 PCDHA6Q9UN73 950 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 PCDHA8Q9Y5H6 950 aa17.65■□□□□ 0.42
VPS26A-207ENST00000490696 A0A0U1RQG5 324 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-207ENST00000490696 CPLX1O14810 134 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 TGFB3P10600 412 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 ICAM3P32942 547 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 CLK2P49760 499 aaKnown RBP17.64■□□□□ 0.41
VPS26A-207ENST00000490696 CDK7P50613 346 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 PURAQ00577 322 aaKnown RBP17.64■□□□□ 0.41
VPS26A-207ENST00000490696 SP2Q02086 613 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 ANKRD33Q7Z3H0 272 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 AFG1LQ8WV93 481 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 VTI1AQ96AJ9 217 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 TOX2Q96NM4 488 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 KIF2CQ99661 725 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 SLKQ9H2G2 1235 aaPredicted RBP17.64■□□□□ 0.41
VPS26A-207ENST00000490696 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 RTEL1Q9NZ71 1219 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 GRIN2DO15399 1336 aa17.64■□□□□ 0.41
VPS26A-207ENST00000490696 RANBP2P49792 3224 aaKnown RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 SPATA31C2B4DYI2 1134 aa17.63■□□□□ 0.41
VPS26A-207ENST00000490696 ARVCFO00192 962 aa17.63■□□□□ 0.41
VPS26A-207ENST00000490696 PQBP1O60828 265 aaKnown RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 FOSP01100 380 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 SSRP1Q08945 709 aaKnown RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 SEMA3FQ13275 785 aa17.63■□□□□ 0.41
VPS26A-207ENST00000490696 GNPTABQ3T906 1256 aa17.63■□□□□ 0.41
VPS26A-207ENST00000490696 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
VPS26A-207ENST00000490696 SLC43A3Q8NBI5 491 aa17.63■□□□□ 0.41
VPS26A-207ENST00000490696 CCDC12Q8WUD4 166 aaPredicted RBP17.63■□□□□ 0.41
VPS26A-207ENST00000490696 C22orf23Q9BZE7 217 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms