RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 ITGA7Q13683 1181 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 RTN1Q16799 776 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 LY6KQ17RY6 165 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
NINJ1-205ENST00000490564 BLOC1S2Q6QNY1 142 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 Q6ZUG5 572 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 VSIG10LQ86VR7 867 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 BADQ92934 168 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 TMEM39AQ9NV64 488 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
NINJ1-205ENST00000490564 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
NINJ1-205ENST00000490564 GOLGA8AA7E2F4 631 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 GOLGA8BA8MQT2 603 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 MEIS2O14770 477 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 TLR3O15455 904 aaKnown RBP12.05□□□□□ -0.48
NINJ1-205ENST00000490564 KPNA6O60684 536 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 RGS20O76081 388 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 GH1P01241 217 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 MYL3P08590 195 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 MYCLP12524 364 aaPredicted RBP12.05□□□□□ -0.48
NINJ1-205ENST00000490564 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 CCND2P30279 289 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 PSMC6P62333 389 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 ARHGAP1Q07960 439 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 LRIT3Q3SXY7 679 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 CCDC82Q8N4S0 544 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 CUL5Q93034 780 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
NINJ1-205ENST00000490564 MTG1Q9BT17 334 aaPredicted RBP12.05□□□□□ -0.48
NINJ1-205ENST00000490564 USP26Q9BXU7 913 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 AGXT2Q9BYV1 514 aa12.05□□□□□ -0.48
NINJ1-205ENST00000490564 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
NINJ1-205ENST00000490564 hCG_1642624A0A1W2PR95 340 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 SOX1O00570 391 aaPredicted RBP12.04□□□□□ -0.48
NINJ1-205ENST00000490564 STAM2O75886 525 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 TIMP1P01033 207 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 MMP3P08254 477 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 RAG1P15918 1043 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
NINJ1-205ENST00000490564 PSMA5P28066 241 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 CDC27P30260 824 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 FGD1P98174 961 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 FUT2Q10981 343 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 BRF1Q92994 677 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 MRVI1Q9Y6F6 885 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
NINJ1-205ENST00000490564 B4GALT4O60513 344 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 TGFB3P10600 412 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
NINJ1-205ENST00000490564 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
NINJ1-205ENST00000490564 WWC2Q6AWC2 1192 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 HEATR3Q7Z4Q2 680 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 GPKOWQ92917 476 aaPredicted RBP eCLIP12.03□□□□□ -0.48
NINJ1-205ENST00000490564 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
NINJ1-205ENST00000490564 LAMA2P24043 3122 aaKnown RBP12.02□□□□□ -0.48
NINJ1-205ENST00000490564 CCDC196A0A1B0GTZ2 297 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 hCG_1984214I3L0E3 225 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 ICAM3P32942 547 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 EVCP57679 992 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 FPGSQ05932 587 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
NINJ1-205ENST00000490564 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 PCNX4Q63HM2 1172 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 NFRKBQ6P4R8 1299 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 DHX37Q8IY37 1157 aaKnown RBP12.02□□□□□ -0.49
NINJ1-205ENST00000490564 ZNF713Q8N859 430 aaPredicted RBP12.02□□□□□ -0.49
NINJ1-205ENST00000490564 PPTC7Q8NI37 304 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
NINJ1-205ENST00000490564 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.49
NINJ1-205ENST00000490564 ALDH8A1Q9H2A2 487 aaPredicted RBP12.02□□□□□ -0.49
NINJ1-205ENST00000490564 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
NINJ1-205ENST00000490564 STXBP3O00186 592 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 HOXD8P13378 290 aaPredicted RBP12.01□□□□□ -0.49
NINJ1-205ENST00000490564 UBA1P22314 1058 aaKnown RBP12.01□□□□□ -0.49
NINJ1-205ENST00000490564 ADD1P35611 737 aaKnown RBP12.01□□□□□ -0.49
NINJ1-205ENST00000490564 SP2Q02086 613 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 SHHQ15465 462 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 DGKDQ16760 1214 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 UBE2SQ16763 222 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 NBPF20Q3BBV1 942 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 C9orf50Q5SZB4 431 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 CELF3Q5SZQ8 465 aaKnown RBP12.01□□□□□ -0.49
NINJ1-205ENST00000490564 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 GPR153Q6NV75 609 aa12.01□□□□□ -0.49
NINJ1-205ENST00000490564 KAT2BQ92831 832 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms