RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 PRDM1O75626 825 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 KRT37O76014 449 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 TTLL1O95922 423 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 TXNP10599 105 aaKnown RBP16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 DBF4BQ8NFT6 615 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 KAT2BQ92831 832 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 ASIC4Q96FT7 647 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 YME1L1Q96TA2 773 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 CCPG1Q9ULG6 757 aa16.3■□□□□ 0.2
EXOSC3-207ENST00000490516 LOC730098B7Z3J9 87 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 UPP2O95045 317 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 CSPG5O95196 566 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 ARIH2O95376 493 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 TRIM71Q2Q1W2 868 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 KCTD1Q719H9 257 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 PUS7LQ9H0K6 701 aaKnown RBP16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 PAG1Q9NWQ8 432 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 GTF2IRD1Q9UHL9 959 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
EXOSC3-207ENST00000490516 PTPDC1A2A3K4 754 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 NFIBO00712 420 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 GRM6O15303 877 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 KDM4AO75164 1064 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 MCCP23508 829 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 SLC1A4P43007 532 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 PDE4BQ07343 736 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 PDE4DQ08499 809 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 SBK1Q52WX2 424 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 SLC30A10Q6XR72 485 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 RASGRP2Q7LDG7 609 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 AFG1LQ8WV93 481 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 PRR12Q9ULL5 1215 aa16.28■□□□□ 0.2
EXOSC3-207ENST00000490516 MMP3P08254 477 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 CTNNB1P35222 781 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 ZNF200P98182 395 aaPredicted RBP16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 PTK7Q13308 1070 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 ERC1Q8IUD2 1116 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 ZNF444Q8N0Y2 327 aaPredicted RBP16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 TOP1MTQ969P6 601 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 MSLNLQ96KJ4 702 aa16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.2
EXOSC3-207ENST00000490516 MYH7BA7E2Y1 1941 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 LOC102724159A0A0B4J2E5 919 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 MED19A0JLT2 244 aaPredicted RBP16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 GSG1L2A8MUP6 293 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 PDGFBP01127 241 aaPredicted RBP16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 ICAM1P05362 532 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 CALML3P27482 149 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 NBL1P41271 181 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 ADAM15Q13444 863 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 CBX2Q14781 532 aaPredicted RBP16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 PWP2Q15269 919 aaKnown RBP16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 C7orf31Q8N865 590 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 BOLA2Q9H3K6 86 aa16.26■□□□□ 0.19
EXOSC3-207ENST00000490516 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 GVINP1Q7Z2Y8 2422 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 GALR2O43603 387 aaPredicted RBP16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 PLA2G6O60733 806 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 EYA4O95677 639 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 NDUFV1P49821 464 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
EXOSC3-207ENST00000490516 EMSYQ7Z589 1322 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 C5orf67F2Z3F1 127 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 EDNRBP24530 442 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 HIC1Q14526 733 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 PLEKHG4Q58EX7 1191 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 ADSSL1Q8N142 457 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 STRBPQ96SI9 672 aaKnown RBP16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 OSBPL7Q9BZF2 842 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 LMAN2LQ9H0V9 348 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 CLEC1BQ9P126 229 aa16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 KMT2BQ9UMN6 2715 aaPredicted RBP16.24■□□□□ 0.19
EXOSC3-207ENST00000490516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 RSPH10B2B2RC85 870 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 LINC00271P0C7V0 271 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 RSPH10BP0C881 870 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 TSPY3P0CV98 308 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 TSPY8P0CW00 308 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 CASTP20810 708 aaKnown RBP16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 BMPR1AP36894 532 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 PSEN2P49810 448 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 ARHGAP1Q07960 439 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 LY6KQ17RY6 165 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 CCDC62Q6P9F0 684 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 FRMD5Q7Z6J6 570 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 SMRP1Q8NCR6 262 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms