RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PRSS53Q2L4Q9 553 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 FNDC3BQ53EP0 1204 aaKnown RBP6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 CWF19L1Q69YN2 538 aaKnown RBP6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 OGFOD3Q6PK18 319 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 ARHGAP27Q6ZUM4 889 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 USP53Q70EK8 1073 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 SHISA5Q8N114 240 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 CHAC2Q8WUX2 184 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 KCTD13Q8WZ19 329 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 TP53INP1Q96A56 240 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 GCC1Q96CN9 775 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 MFSD14AQ96MC6 490 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 HEXIM2Q96MH2 286 aaKnown RBP6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 TMX1Q9H3N1 280 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 C7orf69Q9H7B7 122 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 STOML1Q9UBI4 398 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 SFMBT1Q9UHJ3 866 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 ADAMTS7Q9UKP4 1686 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 PLEKHG1Q9ULL1 1385 aa6.67□□□□□ -1.34
SSX2IP-208ENST00000490476 ADGRL2O95490 1459 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 PLEKHH2Q8IVE3 1493 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 PXDNQ92626 1479 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 SHISA3A0PJX4 238 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 FAM170BA6NMN3 283 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 FAM155AB1AL88 458 aaPredicted RBP6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 PDE8AO60658 829 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 RFPL3O75679 317 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 CD3EP07766 207 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 ITIH2P19823 946 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 SDSP20132 328 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 KIR3DL1P43629 444 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 CYP27C1Q4G0S4 372 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 ZNF765Q7L2R6 523 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 ZAR1Q86SH2 424 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 TMEM145Q8NBT3 493 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 MRPL4Q9BYD3 311 aaKnown RBP6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 NKX2-4Q9H2Z4 354 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 KIAA1107Q9UPP5 1409 aa6.66□□□□□ -1.34
SSX2IP-208ENST00000490476 DNAJC25-GNG10A0A024R161 153 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 C1QTNF9BB2RNN3 333 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 STXBP3O00186 592 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 CAPNS1P04632 268 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 HOXC12P31275 282 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 GFRA1P56159 465 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 TNK2Q07912 1038 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 SCRN1Q12765 414 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 GRB10Q13322 594 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 CDKAL1Q5VV42 579 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 FAM214BQ7L5A3 538 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 C16orf71Q8IYS4 520 aaPredicted RBP6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 SLC17A8Q8NDX2 589 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 SLC7A14Q8TBB6 771 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 GATA6Q92908 595 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 COX4I2Q96KJ9 171 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 SLC52A2Q9HAB3 445 aa6.65□□□□□ -1.34
SSX2IP-208ENST00000490476 PIK3R4Q99570 1358 aa6.65□□□□□ -1.35
SSX2IP-208ENST00000490476 VIRMAQ69YN4 1812 aaKnown RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 A0A087X0B3 334 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 C6orf222P0C671 652 aaPredicted RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 EVA1CP58658 441 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 POU4F1Q01851 419 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 DUSP27Q5VZP5 1158 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 BRAPQ7Z569 592 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 LRRTM3Q86VH5 581 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 THNSL2Q86YJ6 484 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 RPUSD2Q8IZ73 545 aaKnown RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 CCDC140Q96MF4 163 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 TARS2Q9BW92 718 aaKnown RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 SSBP4Q9BWG4 385 aaPredicted RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 FAM126AQ9BYI3 521 aaPredicted RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 CYP26B1Q9NR63 512 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 PRR13Q9NZ81 148 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 TRAF6Q9Y4K3 522 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 CAPN6Q9Y6Q1 641 aa6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 TNRC6CQ9HCJ0 1690 aaKnown RBP6.64□□□□□ -1.35
SSX2IP-208ENST00000490476 DNAJC8O75937 253 aaPredicted RBP6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 GSNP06396 782 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 SOX5P35711 763 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 STAT3P40763 770 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 CTSKP43235 329 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 LBX1P52954 281 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 GABREP78334 506 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 MAP4K2Q12851 820 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 NTRK3Q16288 839 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 FGD2Q7Z6J4 655 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 JAMLQ86YT9 394 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 GCC2Q8IWJ2 1684 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 FAM181AQ8N9Y4 354 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 CICQ96RK0 1608 aaPredicted RBP6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 CAAP1Q9H8G2 361 aa6.63□□□□□ -1.35
SSX2IP-208ENST00000490476 LRRC4CQ9HCJ2 640 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms