RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 WDR5P61964 334 aaKnown RBP9.67□□□□□ -0.86
USP39-216ENST00000490193 GPNMBQ14956 572 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 CCDC96Q2M329 555 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 SYDE2Q5VT97 1194 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 TTBK2Q6IQ55 1244 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 SLC30A10Q6XR72 485 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 SESTD1Q86VW0 696 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 CCDC155Q8N6L0 562 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 CAGE1Q8TC20 777 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 PI4K2BQ8TCG2 481 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 CTAGE1Q96RT6 745 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 MPHOSPH6Q99547 160 aaKnown RBP9.67□□□□□ -0.86
USP39-216ENST00000490193 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP39-216ENST00000490193 MAF1Q9H063 256 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 C11orf16Q9NQ32 467 aa9.67□□□□□ -0.86
USP39-216ENST00000490193 PTPDC1A2A3K4 754 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 PI4K2BG5E9Z4 385 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 CXCL10P02778 98 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 SLC16A2P36021 539 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 KCNJ6P48051 423 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 PDE4DQ08499 809 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 TMEM92Q6UXU6 159 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 RNF207Q6ZRF8 634 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 SPRED2Q7Z698 418 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 ALYREFQ86V81 257 aaKnown RBP9.66□□□□□ -0.86
USP39-216ENST00000490193 EFCAB3Q8N7B9 438 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP39-216ENST00000490193 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 SNX27Q96L92 541 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 TCP11L1Q9NUJ3 509 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
USP39-216ENST00000490193 MUC6Q6W4X9 2439 aa9.66□□□□□ -0.86
USP39-216ENST00000490193 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 LCHNA4D1U4 455 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 B4DLN1 442 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 RANBP6O60518 1105 aaKnown RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 ARIH2O95376 493 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 TXNP10599 105 aaKnown RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 PDHBP11177 359 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 SELPP16109 830 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 CALML3P27482 149 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 MRPL12P52815 198 aaKnown RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 ERVK-21P61565 698 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 RPS6P62753 249 aaKnown RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 ALX1Q15699 326 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 PTGISQ16647 500 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 CCDC62Q6P9F0 684 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 CNKSR3Q6P9H4 555 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 DHX38Q92620 1227 aaKnown RBP9.65□□□□□ -0.86
USP39-216ENST00000490193 COPS5Q92905 334 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 TMEM47Q9BQJ4 181 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 FSD1Q9BTV5 496 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 INCENPQ9NQS7 918 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
USP39-216ENST00000490193 MICAL3Q7RTP6 2002 aa9.65□□□□□ -0.87
USP39-216ENST00000490193 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 MYH6P13533 1939 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 ABHD14A-ACY1A0A1B0GW23 586 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 EFCAB14O75071 495 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 GJB5O95377 273 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 MMP3P08254 477 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 SNHG28P0DPA3 235 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 DEFB103AP81534 67 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 ZNF543Q08ER8 600 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 LEXMQ3ZCV2 418 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 C20orf194Q5TEA3 1177 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 GDF6Q6KF10 455 aaPredicted RBP9.64□□□□□ -0.87
USP39-216ENST00000490193 LRRC8DQ7L1W4 858 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 GDPD5Q8WTR4 605 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 PPP1R13LQ8WUF5 828 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 KAT2BQ92831 832 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 TGS1Q96RS0 853 aaKnown RBP9.64□□□□□ -0.87
USP39-216ENST00000490193 RAD9AQ99638 391 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 UBE2ZQ9H832 354 aaPredicted RBP9.64□□□□□ -0.87
USP39-216ENST00000490193 SUGCTQ9HAC7 445 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 CD320Q9NPF0 282 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 RCAN3Q9UKA8 241 aa9.64□□□□□ -0.87
USP39-216ENST00000490193 FRMPD2Q68DX3 1309 aaPredicted RBP9.63□□□□□ -0.87
USP39-216ENST00000490193 SALL3Q9BXA9 1300 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 MYH7BA7E2Y1 1941 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 LINC01553A4QN01 128 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 PRR33A8MZF0 331 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 NBNO60934 754 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 GH1P01241 217 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 CKBP12277 381 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 ARHGAP1Q07960 439 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 TICAM2Q86XR7 235 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 FAM178BQ8IXR5 827 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 AFG1LQ8WV93 481 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 EMID1Q96A84 441 aaPredicted RBP9.63□□□□□ -0.87
USP39-216ENST00000490193 TTC14Q96N46 770 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 ZBED2Q9BTP6 218 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 GPCPD1Q9NPB8 672 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 GTF2IRD1Q9UHL9 959 aa9.63□□□□□ -0.87
USP39-216ENST00000490193 MTMR7Q9Y216 660 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms