RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 RETREG2Q8NC44 543 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 CLEC4DQ8WXI8 215 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
UBP1-211ENST00000490112 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 THEGQ9P2T0 379 aa12.52□□□□□ -0.41
UBP1-211ENST00000490112 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
UBP1-211ENST00000490112 TNFRSF10AO00220 468 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 TXNP10599 105 aaKnown RBP12.51□□□□□ -0.41
UBP1-211ENST00000490112 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
UBP1-211ENST00000490112 IGFBP4P22692 258 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 HAND2P61296 217 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
UBP1-211ENST00000490112 NMIQ13287 307 aaPredicted RBP12.51□□□□□ -0.41
UBP1-211ENST00000490112 BFSP2Q13515 415 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 TMEM63BQ5T3F8 832 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 PPP2R2DQ66LE6 453 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 SLC30A10Q6XR72 485 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 MCF2L2Q86YR7 1114 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 RILPL2Q969X0 211 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 TRMT13Q9NUP7 481 aaKnown RBP12.51□□□□□ -0.41
UBP1-211ENST00000490112 MYO9BQ13459 2157 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 REV3LO60673 3130 aa12.51□□□□□ -0.41
UBP1-211ENST00000490112 BDP1A6H8Y1 2624 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 HIP1O00291 1037 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 PTGS1P23219 599 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 FAM47CQ5HY64 1035 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 TMEM67Q5HYA8 995 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 ZNF589Q86UQ0 364 aaPredicted RBP12.5□□□□□ -0.41
UBP1-211ENST00000490112 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 SCLYQ96I15 445 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 ASB2Q96Q27 587 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 IWS1Q96ST2 819 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 CRBNQ96SW2 442 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 SLC9A7Q96T83 725 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
UBP1-211ENST00000490112 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 YBX2Q9Y2T7 364 aaKnown RBP12.5□□□□□ -0.41
UBP1-211ENST00000490112 ABCB11O95342 1321 aa12.5□□□□□ -0.41
UBP1-211ENST00000490112 SCN10AQ9Y5Y9 1956 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
UBP1-211ENST00000490112 CYP2C9P11712 490 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 SDSP20132 328 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 ADGRE1Q14246 886 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 STXBP2Q15833 593 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 AAK1Q2M2I8 961 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
UBP1-211ENST00000490112 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 LNPKQ9C0E8 428 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 OSBPL3Q9H4L5 887 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 KAT14Q9H8E8 782 aa12.49□□□□□ -0.41
UBP1-211ENST00000490112 GBF1Q92538 1859 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
UBP1-211ENST00000490112 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 IQCF3P0C7M6 154 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 POU3F3P20264 500 aaPredicted RBP12.48□□□□□ -0.41
UBP1-211ENST00000490112 PSEN2P49810 448 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 RABGGTBP53611 331 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 CCDC85BQ15834 202 aaPredicted RBP12.48□□□□□ -0.41
UBP1-211ENST00000490112 USH1GQ495M9 461 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 DEFB128Q7Z7B8 93 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 SESTD1Q86VW0 696 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 TBC1D10CQ8IV04 446 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBP1-211ENST00000490112 CNNM2Q9H8M5 875 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 CTNNA3Q9UI47 895 aa12.48□□□□□ -0.41
UBP1-211ENST00000490112 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
UBP1-211ENST00000490112 NEDD4P46934 1319 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 EIF3JO75822 258 aaKnown RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 PPP1R37O75864 691 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 GH1P01241 217 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 PARP1P09874 1014 aaKnown RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 GOLGA8HP0CJ92 632 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 IMMTQ16891 758 aaKnown RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 AFAP1L1Q8TED9 768 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 RMDN3Q96TC7 470 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 KRT23Q9C075 422 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
UBP1-211ENST00000490112 MAP3K20Q9NYL2 800 aaKnown RBP12.47□□□□□ -0.41
UBP1-211ENST00000490112 KDM4AO75164 1064 aa12.46□□□□□ -0.41
UBP1-211ENST00000490112 FOXK1P85037 733 aa12.46□□□□□ -0.41
UBP1-211ENST00000490112 TRAF1Q13077 416 aa12.46□□□□□ -0.41
UBP1-211ENST00000490112 PTGISQ16647 500 aa12.46□□□□□ -0.41
UBP1-211ENST00000490112 DGKDQ16760 1214 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms