RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 A2ML1A8K2U0 1454 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 JAK2O60674 1132 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ACTN1P12814 892 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PHKG2P15735 406 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PLA2G4DQ86XP0 818 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PPP1R9AQ9ULJ8 1098 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 SLC26A4O43511 780 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 LIFRP42702 1097 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 NLGN1Q8N2Q7 840 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 SLC7A3Q8WY07 619 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 KANSL2Q9H9L4 492 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 CPSF1Q10570 1443 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 IFNB1P01574 187 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 CIITAP33076 1130 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 RNASE9P60153 205 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 MYO1EQ12965 1108 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 KLC3Q6P597 504 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 P2RX5Q93086 422 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 DDX27Q96GQ7 796 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 EFCC1Q9HA90 598 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 CAPN7Q9Y6W3 813 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 TRPM1Q7Z4N2 1603 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 OPHN1O60890 802 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ICA1Q05084 483 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 MAPKAPK5Q8IW41 473 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ENOX1Q8TC92 643 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 KIFC3Q9BVG8 833 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PCDHA7Q9UN72 937 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PPIP5K2O43314 1243 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 FBLN1P23142 703 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ECE1P42892 770 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 NSMFQ6X4W1 530 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ZNF579Q8NAF0 562 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ANGPTL2Q9UKU9 493 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PAMP19021 973 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 CPXCR1Q8N123 301 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 USP28Q96RU2 1077 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 RABEP2Q9H5N1 569 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 SYNGAP1Q96PV0 1343 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 RFX1P22670 979 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 POLR2FP61218 127 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ABCB5Q2M3G0 1257 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 SUPT20HL1Q3ZLR7 823 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 NDUFAF2Q8N183 169 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 METTL13Q8N6R0 699 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ST7Q9NRC1 585 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PKD2L1Q9P0L9 805 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 ZNF215Q9UL58 517 aaPredicted RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 SCINQ9Y6U3 715 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 DDX5P17844 614 aaKnown RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 NDUFA8P51970 172 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 NBPF9Q3BBW0 867 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 FAM160B2Q86V87 743 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 TBC1D7Q9P0N9 293 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 SRPRBQ9Y5M8 271 aaKnown RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ZNF804BA4D1E1 1349 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 GADD45BO75293 160 aaPredicted RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ZBED6P86452 979 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 PSMD6Q15008 389 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 NELFCDQ8IXH7 590 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 KIRREL3Q8IZU9 778 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 MORC4Q8TE76 937 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 SCYL1Q96KG9 808 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 DCTN3O75935 186 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 PSPC1Q8WXF1 523 aaKnown RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 MAGOHBQ96A72 148 aaKnown RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ZCCHC11Q5TAX3 1644 aaKnown RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 GPC4O75487 556 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 CUL4AQ13619 759 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 STK36Q9NRP7 1315 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ABCB4P21439 1286 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 CCND2P30279 289 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ARMCX2Q7L311 632 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 PPP1R13BQ96KQ4 1090 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 FANCLQ9NW38 375 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 SLC8A2Q9UPR5 921 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 CEP152O94986 1710 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 IQANK1A0A1B0GTG1 560 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 DDX39AO00148 427 aaKnown RBP9.59□□□□□ -0.87
LSAMP-205ENST00000490035 INPP1P49441 399 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 PPM1KQ8N3J5 372 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 TRIM62Q9BVG3 475 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 EDEM3Q9BZQ6 932 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 PCDHA1Q9Y5I3 950 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 SLFN14P0C7P3 912 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ARL13BQ3SXY8 428 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 NXNQ6DKJ4 435 aa9.59□□□□□ -0.87
LSAMP-205ENST00000490035 ARHGEF25Q86VW2 580 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms