RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SEC14L1Q92503 715 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 RELTQ969Z4 430 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 AP5M1Q9H0R1 490 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 B8ZZF3 427 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 PRRG2O14669 202 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 FPR2P25090 351 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 LTBRP36941 435 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 BCL6P41182 706 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 NFIXQ14938 502 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 DDR2Q16832 855 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 CEP68Q76N32 757 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 PPIL6Q8IXY8 311 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 TMEM145Q8NBT3 493 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 RCBTB1Q8NDN9 531 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 ZNF526Q8TF50 670 aaPredicted RBP6.19□□□□□ -1.42
HMGN1-218ENST00000490032 NOX5Q96PH1 765 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 BTG4Q9NY30 223 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 R3HCC1Q9Y3T6 440 aaKnown RBP6.19□□□□□ -1.42
HMGN1-218ENST00000490032 NPFFR2Q9Y5X5 522 aa6.19□□□□□ -1.42
HMGN1-218ENST00000490032 A0A1W2PQU0 124 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 AGRPO00253 132 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 MYO1BO43795 1136 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 C8BP07358 591 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 GRIA2P42262 883 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 KCNJ6P48051 423 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 KCNC1P48547 511 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 PPP2R2AP63151 447 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 MAP4K2Q12851 820 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 LINC00482Q8N8I6 264 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 CXorf38Q8TB03 319 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 FBXL7Q9UJT9 491 aa6.18□□□□□ -1.42
HMGN1-218ENST00000490032 H7BY64 318 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 FOXD2O60548 495 aaPredicted RBP6.17□□□□□ -1.42
HMGN1-218ENST00000490032 LCP1P13796 627 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 ETV3LQ6ZN32 361 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 FRMD5Q7Z6J6 570 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 ADGRG2Q8IZP9 1017 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 TRMT2BQ96GJ1 504 aaKnown RBP6.17□□□□□ -1.42
HMGN1-218ENST00000490032 TMEM169Q96HH4 297 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 TEPSINQ96N21 525 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 PCDH18Q9HCL0 1135 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 ST7Q9NRC1 585 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 SPATA6Q9NWH7 488 aaPredicted RBP6.17□□□□□ -1.42
HMGN1-218ENST00000490032 PALD1Q9ULE6 856 aa6.17□□□□□ -1.42
HMGN1-218ENST00000490032 A0A1B0GTL3 188 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 E9PSI1 815 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 CYP2C8P10632 490 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 LSAMPQ13449 338 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 FAM126BQ8IXS8 530 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 ZDHHC14Q8IZN3 488 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 CARFQ8N187 725 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 KCTD13Q8WZ19 329 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 ZNF652Q9Y2D9 606 aa6.16□□□□□ -1.42
HMGN1-218ENST00000490032 RAB33AQ14088 237 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 EMC4Q5J8M3 183 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 MILR1Q7Z6M3 343 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 ST13P5Q8NFI4 369 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-218ENST00000490032 ZBTB8AQ96BR9 441 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 DDX11Q96FC9 970 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 GORASP1Q9BQQ3 440 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 SPATA25Q9BR10 227 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 CDIP1Q9H305 208 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 COA3Q9Y2R0 106 aaPredicted RBP6.15□□□□□ -1.42
HMGN1-218ENST00000490032 PCDHA2Q9Y5H9 948 aa6.15□□□□□ -1.42
HMGN1-218ENST00000490032 IQCA1LA6NCM1 817 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 DLX3O60479 287 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 TADA3O75528 432 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 SYN1P17600 705 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 ZC3H6P61129 1189 aaKnown RBP6.14□□□□□ -1.43
HMGN1-218ENST00000490032 HSP90AA2PQ14568 343 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-218ENST00000490032 CHRNA2Q15822 529 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 IER2Q9BTL4 223 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 C11orf84Q9BUA3 381 aaPredicted RBP6.14□□□□□ -1.43
HMGN1-218ENST00000490032 GPR27Q9NS67 375 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 NTMQ9P121 344 aa6.14□□□□□ -1.43
HMGN1-218ENST00000490032 HGSO14964 777 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 FGFR1P11362 822 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 THBS2P35442 1172 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 BUD31P41223 144 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 SARSP49591 514 aaKnown RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 ZFYVE27Q5T4F4 411 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 RSPO2Q6UXX9 243 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 ZC3H18Q86VM9 953 aaKnown RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 FAM26EQ8N5C1 309 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 KYQ8NBH2 561 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 ZNF669Q96BR6 464 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 AARSD1Q9BTE6 412 aaKnown RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 ADAM7Q9H2U9 754 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 NGRNQ9NPE2 291 aaKnown RBP6.13□□□□□ -1.43
HMGN1-218ENST00000490032 ARHGEF4Q9NR80 690 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 CLDND1Q9NY35 253 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
HMGN1-218ENST00000490032 SMARCA5O60264 1052 aaPredicted RBP6.12□□□□□ -1.43
HMGN1-218ENST00000490032 NOBOXO60393 691 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 ITGA1P56199 1179 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 SMAD4Q13485 552 aaKnown RBP6.12□□□□□ -1.43
HMGN1-218ENST00000490032 CR1LQ2VPA4 569 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 NAALADL2Q58DX5 795 aa6.12□□□□□ -1.43
HMGN1-218ENST00000490032 NT5DC1Q5TFE4 455 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms