RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 ASH1LQ9NR48 2969 aaKnown RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 MYH7BA7E2Y1 1941 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 PLXNA4Q9HCM2 1894 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 PI15O43692 258 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 ZBED4O75132 1171 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 IDH1O75874 414 aaKnown RBP8.77□□□□□ -1.01
COL9A1-209ENST00000489861 SP100P23497 879 aaPredicted RBP8.77□□□□□ -1.01
COL9A1-209ENST00000489861 DNAJB1P25685 340 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 BMPR1AP36894 532 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 CLCN5P51795 746 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 TRIM71Q2Q1W2 868 aaKnown RBP8.77□□□□□ -1.01
COL9A1-209ENST00000489861 TTC39AQ5SRH9 613 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 ZNF618Q5T7W0 954 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 CWF19L1Q69YN2 538 aaKnown RBP8.77□□□□□ -1.01
COL9A1-209ENST00000489861 ZBTB33Q86T24 672 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 OR6J1Q8NGC5 347 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 CYP2W1Q8TAV3 490 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 KIFC2Q96AC6 838 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 DBNDD2Q9BQY9 259 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 WDR11Q9BZH6 1224 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 VTA1Q9NP79 307 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 SMC4Q9NTJ3 1288 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 COG6Q9Y2V7 657 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 R4GN57 208 aa8.77□□□□□ -1.01
COL9A1-209ENST00000489861 HELZ2Q9BYK8 2649 aaKnown RBP8.76□□□□□ -1.01
COL9A1-209ENST00000489861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.76□□□□□ -1.01
COL9A1-209ENST00000489861 A6NJR5 290 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 MMP1P03956 469 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 RB1P06400 928 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 ADRB1P08588 477 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
COL9A1-209ENST00000489861 RBM10P98175 930 aaKnown RBP8.76□□□□□ -1.01
COL9A1-209ENST00000489861 CERS3Q8IU89 383 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 MORC4Q8TE76 937 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 SDR42E1Q8WUS8 393 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 COPS5Q92905 334 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 CHAMP1Q96JM3 812 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 C11orf84Q9BUA3 381 aaPredicted RBP8.76□□□□□ -1.01
COL9A1-209ENST00000489861 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.76□□□□□ -1.01
COL9A1-209ENST00000489861 OSBPL7Q9BZF2 842 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 ACAD9Q9H845 621 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 KANSL2Q9H9L4 492 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 SWAP70Q9UH65 585 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 TTC3P53804 2025 aa8.76□□□□□ -1.01
COL9A1-209ENST00000489861 CYP2D7A0A087X1C5 515 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 RBM47A0AV96 593 aaKnown RBP8.75□□□□□ -1.01
COL9A1-209ENST00000489861 DCDC2BA2VCK2 349 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 IGSF3O75054 1194 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 NDUFB10O96000 172 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 NRIP1P48552 1158 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 CDK8P49336 464 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 COL9A3Q14050 684 aaPredicted RBP8.75□□□□□ -1.01
COL9A1-209ENST00000489861 KIAA0319Q5VV43 1072 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 RBM23Q86U06 439 aaKnown RBP8.75□□□□□ -1.01
COL9A1-209ENST00000489861 SESTD1Q86VW0 696 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 CCDC105Q8IYK2 499 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 UBALD2Q8IYN6 164 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 CRIPAKQ8N1N5 446 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 FIBCD1Q8N539 461 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 VN1R2Q8NFZ6 395 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 RUBCNQ92622 972 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 KAT2BQ92831 832 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 CCDC17Q96LX7 622 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 HAUS7Q99871 368 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 SEMA4AQ9H3S1 761 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 ANTXR1Q9H6X2 564 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 DCP1AQ9NPI6 582 aaPredicted RBP8.75□□□□□ -1.01
COL9A1-209ENST00000489861 RNF146Q9NTX7 359 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 SORCS3Q9UPU3 1222 aa8.75□□□□□ -1.01
COL9A1-209ENST00000489861 F5H6K3 240 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 IPO8O15397 1037 aaKnown RBP8.74□□□□□ -1.01
COL9A1-209ENST00000489861 SRGAP3O43295 1099 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 KPNA6O60684 536 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 GNAI3P08754 354 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 NPR3P17342 541 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 OAZ1P54368 228 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 ZNF200P98182 395 aaPredicted RBP8.74□□□□□ -1.01
COL9A1-209ENST00000489861 KLRC3Q07444 240 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 MTMR3Q13615 1198 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 PLEKHG4Q58EX7 1191 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 MUM1L1Q5H9M0 696 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 DTWD2Q8NBA8 298 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 ZNF512BQ96KM6 892 aaPredicted RBP8.74□□□□□ -1.01
COL9A1-209ENST00000489861 IFIH1Q9BYX4 1025 aaKnown RBP8.74□□□□□ -1.01
COL9A1-209ENST00000489861 CYP39A1Q9NYL5 469 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 GTF2IRD1Q9UHL9 959 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 PLAGL2Q9UPG8 496 aa8.74□□□□□ -1.01
COL9A1-209ENST00000489861 CTDP1Q9Y5B0 961 aaPredicted RBP8.74□□□□□ -1.01
COL9A1-209ENST00000489861 MAGEB6P1A0A0J9YX57 407 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 AOC1P19801 751 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 SLFN5Q08AF3 891 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 HIC1Q14526 733 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 CCDC158Q5M9N0 1113 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 FLCNQ8NFG4 579 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
COL9A1-209ENST00000489861 IL17RAQ96F46 866 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 TRERF1Q96PN7 1200 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 MEIS3Q99687 375 aa8.73□□□□□ -1.01
COL9A1-209ENST00000489861 CRNKL1Q9BZJ0 848 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms