RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 MAGEC2Q9UBF1 373 aaPredicted RBP10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 DNAI1Q9UI46 699 aa10.73□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TNS1Q9HBL0 1735 aaKnown RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SIPA1L1O43166 1804 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PNMA6FA0A0J9YX94 578 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 BICDL2A1A5D9 508 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PLSCR1O15162 318 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 KLRC4O43908 158 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MMP10P09238 476 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 FECHP22830 423 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 EEF1GP26641 437 aaKnown RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CDC25AP30304 524 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCT6AP40227 531 aaKnown RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PRCPP42785 496 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CRKP46108 304 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RBL2Q08999 1139 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CALCRLQ16602 461 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TCP11X2Q5H9J9 407 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TOGARAM2Q6ZUX3 1019 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 FAM114A1Q8IWE2 563 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GIMAP8Q8ND71 665 aaPredicted RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 DHTKD1Q96HY7 919 aaPredicted RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CDK5RAP3Q96JB5 506 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 C7orf25Q9BPX7 421 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 GLT8D2Q9H1C3 349 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 BIN2Q9UBW5 565 aaPredicted RBP10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
RAB3GAP1-205ENST00000489858 FAM187AA6NFU0 413 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TNFRSF10AO00220 468 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CASQ1P31415 396 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 SCNN1DP51172 638 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ASIC1P78348 528 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 HDLBPQ00341 1268 aaKnown RBP10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CCDC93Q567U6 631 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 STYK1Q6J9G0 422 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 C2CD5Q86YS7 1000 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TMTC1Q8IUR5 882 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 MNS1Q8NEH6 495 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 DCAF4Q8WV16 495 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 CUL5Q93034 780 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 ZDHHC15Q96MV8 337 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TRIM34Q9BYJ4 488 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 LRRC27Q9C0I9 530 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 JMJD4Q9H9V9 463 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 TMEM260Q9NX78 707 aa10.71□□□□□ -0.69
RAB3GAP1-205ENST00000489858 COL2A1P02458 1487 aaPredicted RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 A0A1W2PQC6 194 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 LRRC10BA6NIK2 292 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 LGALS16A8MUM7 142 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 URI1O94763 535 aaPredicted RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 GYPCP04921 128 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 GCFC2P16383 781 aaKnown RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 CCNE1P24864 410 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 TNNI2P48788 182 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 EIF6P56537 245 aaKnown RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 GNG11P61952 73 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 ATP2B2Q01814 1243 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 PDE4DQ08499 809 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 APOBEC3HQ6NTF7 200 aaKnown RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 CNNM4Q6P4Q7 775 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 ADGRF4Q8IZF3 695 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 P2RX5Q93086 422 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 ZNF622Q969S3 477 aaKnown RBP eCLIP10.7□□□□□ -0.71e-8■□□□□ 11.1
RAB3GAP1-205ENST00000489858 COA7Q96BR5 231 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 PLIN2Q99541 437 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 FEZ1Q99689 392 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 MXD3Q9BW11 206 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 MRIQ9BWK5 157 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 TRIM9Q9C026 710 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 VPS16Q9H269 839 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 DHX36Q9H2U1 1008 aaKnown RBP10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 LRWD1Q9UFC0 647 aa10.7□□□□□ -0.7
RAB3GAP1-205ENST00000489858 SOWAHDA6NJG2 315 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 ZBTB5O15062 677 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 SLC26A4O43511 780 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 APBA3O96018 575 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 CASP14P31944 242 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 TECP42680 631 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 TXKP42681 527 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 UBXN1Q04323 297 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 ELF2Q15723 593 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 MORN1Q5T089 497 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 STRIP1Q5VSL9 837 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 TTI2Q6NXR4 508 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 CYP26C1Q6V0L0 522 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 SV2BQ7L1I2 683 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 CLEC10AQ8IUN9 316 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 CPLX3Q8WVH0 158 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 MTMR9Q96QG7 549 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 NUP88Q99567 741 aaPredicted RBP10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 ARID3AQ99856 593 aa10.69□□□□□ -0.7
RAB3GAP1-205ENST00000489858 DESI2Q9BSY9 194 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms