RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 SELPP16109 830 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 KCNJ6P48051 423 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 WDR5P61964 334 aaKnown RBP17.56■□□□□ 0.4
FAM3D-204ENST00000489857 RBL2Q08999 1139 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 TCTN1Q2MV58 587 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 LRRC8DQ7L1W4 858 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 RILPL2Q969X0 211 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 COG5Q9UP83 839 aa17.56■□□□□ 0.4
FAM3D-204ENST00000489857 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 ZNF213O14771 459 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 SDSP20132 328 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
FAM3D-204ENST00000489857 DEFB103AP81534 67 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 STXBP2Q15833 593 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 ANKS1AQ92625 1134 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 IWS1Q96ST2 819 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 HDAC6Q9UBN7 1215 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 GTF2IRD1Q9UHL9 959 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 DDX41Q9UJV9 622 aaKnown RBP17.55■□□□□ 0.4
FAM3D-204ENST00000489857 XIRP2A4UGR9 3374 aa17.55■□□□□ 0.4
FAM3D-204ENST00000489857 NBNO60934 754 aa17.54■□□□□ 0.4
FAM3D-204ENST00000489857 CXCL10P02778 98 aa17.54■□□□□ 0.4
FAM3D-204ENST00000489857 EIF2AK2P19525 551 aaKnown RBP17.54■□□□□ 0.4
FAM3D-204ENST00000489857 ASPRV1Q53RT3 343 aa17.54■□□□□ 0.4
FAM3D-204ENST00000489857 IQCA1Q86XH1 822 aa17.54■□□□□ 0.4
FAM3D-204ENST00000489857 MCF2L2Q86YR7 1114 aa17.54■□□□□ 0.4
FAM3D-204ENST00000489857 ZSCAN10Q96SZ4 725 aaPredicted RBP17.54■□□□□ 0.4
FAM3D-204ENST00000489857 JMJD4Q9H9V9 463 aa17.54■□□□□ 0.4
FAM3D-204ENST00000489857 COL4A4P53420 1690 aaPredicted RBP17.53■□□□□ 0.4
FAM3D-204ENST00000489857 B4E1Z4 1266 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 CKBP12277 381 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 PSEN2P49810 448 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
FAM3D-204ENST00000489857 DGKDQ16760 1214 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 CCDC178Q5BJE1 867 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 CNKSR3Q6P9H4 555 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 TRAF7Q6Q0C0 670 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 FBXO11Q86XK2 927 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
FAM3D-204ENST00000489857 GDPD5Q8WTR4 605 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 WNT8BQ93098 351 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 HLA-CQ95604 372 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 EMID1Q96A84 441 aaPredicted RBP17.53■□□□□ 0.4
FAM3D-204ENST00000489857 ALG1Q9BT22 464 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 C1QTNF1Q9BXJ1 281 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 VAT1LQ9HCJ6 419 aa17.53■□□□□ 0.4
FAM3D-204ENST00000489857 MRPL11Q9Y3B7 192 aaKnown RBP17.53■□□□□ 0.4
FAM3D-204ENST00000489857 HAS3O00219 553 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 OPLAHO14841 1288 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 EIF3JO75822 258 aaKnown RBP17.52■□□□□ 0.4
FAM3D-204ENST00000489857 F2P00734 622 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 NR3C2P08235 984 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 ZNF286BP0CG31 522 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 NT5C2P49902 561 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
FAM3D-204ENST00000489857 C7orf31Q8N865 590 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.4
FAM3D-204ENST00000489857 LAMA4Q16363 1823 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 TRIP12Q14669 1992 aaPredicted RBP17.51■□□□□ 0.39
FAM3D-204ENST00000489857 DHX16O60231 1041 aaKnown RBP17.51■□□□□ 0.39
FAM3D-204ENST00000489857 RGS20O76081 388 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 GJB5O95377 273 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
FAM3D-204ENST00000489857 CFBP00751 764 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 PLA2G5P39877 138 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 ZNF200P98182 395 aaPredicted RBP17.51■□□□□ 0.39
FAM3D-204ENST00000489857 LAMC2Q13753 1193 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 MBTPS1Q14703 1052 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 MFSD10Q14728 455 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 KIAA0753Q2KHM9 967 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
FAM3D-204ENST00000489857 PLEKHM2Q8IWE5 1019 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 PPTC7Q8NI37 304 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 EPHX3Q9H6B9 360 aa17.51■□□□□ 0.39
FAM3D-204ENST00000489857 ABHD14A-ACY1A0A1B0GW23 586 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 LINC01553A4QN01 128 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 PARP1P09874 1014 aaKnown RBP17.5■□□□□ 0.39
FAM3D-204ENST00000489857 HOXD8P13378 290 aaPredicted RBP17.5■□□□□ 0.39
FAM3D-204ENST00000489857 HSD17B4P51659 736 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 GHRHRQ02643 423 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 PTK7Q13308 1070 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 HIC1Q14526 733 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 ZNF618Q5T7W0 954 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 SMC5Q8IY18 1101 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 STAG2Q8N3U4 1231 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 KATNAL1Q9BW62 490 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 MTUS1Q9ULD2 1270 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 KIAA1217Q5T5P2 1943 aa17.5■□□□□ 0.39
FAM3D-204ENST00000489857 PPP1R11O60927 126 aaPredicted RBP17.49■□□□□ 0.39
FAM3D-204ENST00000489857 ERVK-21P61565 698 aa17.49■□□□□ 0.39
FAM3D-204ENST00000489857 B4GALNT3Q6L9W6 998 aa17.49■□□□□ 0.39
FAM3D-204ENST00000489857 FAM117BQ6P1L5 589 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms