RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 RBM27Q9P2N5 1060 aaKnown RBP22.02■■□□□ 1.12
EPHB4-207ENST00000489808 PRKAG2Q9UGJ0 569 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 A0A0U1RQG5 324 aaPredicted RBP22.01■■□□□ 1.11
EPHB4-207ENST00000489808 PQBP1O60828 265 aaKnown RBP22.01■■□□□ 1.11
EPHB4-207ENST00000489808 MAGEA10P43363 369 aaPredicted RBP22.01■■□□□ 1.11
EPHB4-207ENST00000489808 ANAPC15P60006 121 aa22.01■■□□□ 1.11
EPHB4-207ENST00000489808 PDRG1Q9NUG6 133 aa22.01■■□□□ 1.11
EPHB4-207ENST00000489808 ALPK3Q96L96 1907 aa22.01■■□□□ 1.11
EPHB4-207ENST00000489808 A6NJR5 290 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 SEC24BO95487 1268 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 BMP8BP34820 402 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 BRDTQ58F21 947 aaPredicted RBP22■■□□□ 1.11
EPHB4-207ENST00000489808 KCNV1Q6PIU1 500 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 SH3RF1Q7Z6J0 888 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 SLC43A3Q8NBI5 491 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 ZFP91Q96JP5 570 aaPredicted RBP22■■□□□ 1.11
EPHB4-207ENST00000489808 PDLIM7Q9NR12 457 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 POLR3EQ9NVU0 708 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 PCDH10Q9P2E7 1040 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 MRVI1Q9Y6F6 885 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 FRMPD4Q14CM0 1322 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 MYH6P13533 1939 aa22■■□□□ 1.11
EPHB4-207ENST00000489808 NID2Q14112 1375 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 TRIM43BA6NCK2 446 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 DCDC2CA8MYV0 355 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 GH1P01241 217 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 MRPS9P82933 396 aaKnown RBP21.99■■□□□ 1.11
EPHB4-207ENST00000489808 ARHGAP1Q07960 439 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 FAAP100Q0VG06 881 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 ITGA7Q13683 1181 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 TYW1BQ6NUM6 668 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 TRIM43Q96BQ3 446 aaPredicted RBP21.99■■□□□ 1.11
EPHB4-207ENST00000489808 ZNF274Q96GC6 653 aaPredicted RBP21.99■■□□□ 1.11
EPHB4-207ENST00000489808 PRDM5Q9NQX1 630 aaPredicted RBP21.99■■□□□ 1.11
EPHB4-207ENST00000489808 BARHL2Q9NY43 387 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 GRIN2DO15399 1336 aa21.99■■□□□ 1.11
EPHB4-207ENST00000489808 LRRC37A2A6NM11 1700 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 hCG_1984214I3L0E3 225 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 STXBP3O00186 592 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 PRPF3O43395 683 aaKnown RBP21.98■■□□□ 1.11
EPHB4-207ENST00000489808 KPNA6O60684 536 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 STAM2O75886 525 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 MYL3P08590 195 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 CLTBP09497 229 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 TGFB3P10600 412 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 NAPAP54920 295 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 CCT2P78371 535 aaKnown RBP21.98■■□□□ 1.11
EPHB4-207ENST00000489808 PURAQ00577 322 aaKnown RBP21.98■■□□□ 1.11
EPHB4-207ENST00000489808 NTRK3Q16288 839 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 UBE2SQ16763 222 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 PFKFB3Q16875 520 aaPredicted RBP21.98■■□□□ 1.11
EPHB4-207ENST00000489808 XRRA1Q6P2D8 792 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 ZNF713Q8N859 430 aaPredicted RBP21.98■■□□□ 1.11
EPHB4-207ENST00000489808 AFG1LQ8WV93 481 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 LARP6Q9BRS8 491 aaKnown RBP21.98■■□□□ 1.11
EPHB4-207ENST00000489808 SEZ6LQ9BYH1 1024 aa21.98■■□□□ 1.11
EPHB4-207ENST00000489808 MDM2Q00987 491 aaPredicted RBP21.97■■□□□ 1.11
EPHB4-207ENST00000489808 LAMC2Q13753 1193 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 PCNX4Q63HM2 1172 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 PPP1R18Q6NYC8 613 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 TEX2Q8IWB9 1127 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 EMID1Q96A84 441 aaPredicted RBP21.97■■□□□ 1.11
EPHB4-207ENST00000489808 IL17RAQ96F46 866 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 LBHD1Q9BQE6 289 aaPredicted RBP21.97■■□□□ 1.11
EPHB4-207ENST00000489808 MTG1Q9BT17 334 aaPredicted RBP21.97■■□□□ 1.11
EPHB4-207ENST00000489808 ALDH8A1Q9H2A2 487 aaPredicted RBP21.97■■□□□ 1.11
EPHB4-207ENST00000489808 RIC8AQ9NPQ8 531 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 TMEM39AQ9NV64 488 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 RTEL1Q9NZ71 1219 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 PCDHA6Q9UN73 950 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 PCDHA8Q9Y5H6 950 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 MROH7Q68CQ1 1323 aa21.97■■□□□ 1.11
EPHB4-207ENST00000489808 SMCO2A6NFE2 343 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 KIAA0355O15063 1070 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 SCG2P13521 617 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 IFNAR1P17181 557 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 ICAM3P32942 547 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 PSMC6P62333 389 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 SP2Q02086 613 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 PKN1Q16512 942 aa21.96■■□□□ 1.11
EPHB4-207ENST00000489808 DHX37Q8IY37 1157 aaKnown RBP21.96■■□□□ 1.11
EPHB4-207ENST00000489808 INPP4AQ96PE3 977 aaPredicted RBP21.96■■□□□ 1.11
EPHB4-207ENST00000489808 NCOA5Q9HCD5 579 aaKnown RBP21.96■■□□□ 1.11
EPHB4-207ENST00000489808 SPDYE3A6NKU9 549 aa21.95■■□□□ 1.1
EPHB4-207ENST00000489808 SPATA31C2B4DYI2 1134 aa21.95■■□□□ 1.1
EPHB4-207ENST00000489808 GNPTABQ3T906 1256 aa21.95■■□□□ 1.1
EPHB4-207ENST00000489808 CELF3Q5SZQ8 465 aaKnown RBP21.95■■□□□ 1.1
EPHB4-207ENST00000489808 MYSM1Q5VVJ2 828 aa21.95■■□□□ 1.1
EPHB4-207ENST00000489808 FAM126BQ8IXS8 530 aa21.95■■□□□ 1.1
EPHB4-207ENST00000489808 PHKBQ93100 1093 aa21.95■■□□□ 1.1
EPHB4-207ENST00000489808 UBE2OQ9C0C9 1292 aaKnown RBP21.95■■□□□ 1.1
EPHB4-207ENST00000489808 RANBP2P49792 3224 aaKnown RBP21.94■■□□□ 1.1
EPHB4-207ENST00000489808 A0A1W2PPC1 479 aa21.94■■□□□ 1.1
EPHB4-207ENST00000489808 MMP3P08254 477 aa21.94■■□□□ 1.1
EPHB4-207ENST00000489808 ITGB8P26012 769 aa21.94■■□□□ 1.1
EPHB4-207ENST00000489808 ADCY7P51828 1080 aa21.94■■□□□ 1.1
EPHB4-207ENST00000489808 AKAP17AQ02040 695 aaKnown RBP21.94■■□□□ 1.1
EPHB4-207ENST00000489808 BADQ92934 168 aa21.94■■□□□ 1.1
EPHB4-207ENST00000489808 RNF26Q9BY78 433 aaPredicted RBP21.94■■□□□ 1.1
EPHB4-207ENST00000489808 GLT8D2Q9H1C3 349 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms