RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 PPP1R18Q6NYC8 613 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 SEPT14Q6ZU15 432 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 VSIG10LQ86VR7 867 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 CCDC83Q8IWF9 413 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 TRIM22Q8IYM9 498 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 ZNF713Q8N859 430 aaPredicted RBP9.02□□□□□ -0.96
SSR1-210ENST00000489567 NSUN7Q8NE18 718 aaKnown RBP9.02□□□□□ -0.96
SSR1-210ENST00000489567 CUL5Q93034 780 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 PAWRQ96IZ0 340 aaKnown RBP9.02□□□□□ -0.96
SSR1-210ENST00000489567 IWS1Q96ST2 819 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 ZMYND12Q9H0C1 365 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 XPNPEP3Q9NQH7 507 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.96
SSR1-210ENST00000489567 GNEQ9Y223 722 aaKnown RBP9.02□□□□□ -0.96
SSR1-210ENST00000489567 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.96
SSR1-210ENST00000489567 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.97
SSR1-210ENST00000489567 ESYT2A0FGR8 921 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 CTAGE5O15320 804 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 ADAMTS4O75173 837 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 DUSP11O75319 330 aaKnown RBP9.02□□□□□ -0.97
SSR1-210ENST00000489567 FARP2O94887 1054 aaPredicted RBP9.02□□□□□ -0.97
SSR1-210ENST00000489567 DEXIO95424 95 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 RARBP10826 455 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 ADCY7P51828 1080 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 TNFAIP2Q03169 654 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 LRRC41Q15345 812 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 NPY5RQ15761 445 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 STXBP2Q15833 593 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 CPLX2Q6PUV4 134 aaKnown RBP9.02□□□□□ -0.97
SSR1-210ENST00000489567 RASGRP4Q8TDF6 673 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 COPS5Q92905 334 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 WDR11Q9BZH6 1224 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 STK36Q9NRP7 1315 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 SYNRGQ9UMZ2 1314 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 PCDHA6Q9UN73 950 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 PCDHA8Q9Y5H6 950 aa9.02□□□□□ -0.97
SSR1-210ENST00000489567 EIF3JO75822 258 aaKnown RBP9.01□□□□□ -0.97
SSR1-210ENST00000489567 CDKL5O76039 1030 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 MRPL12P52815 198 aaKnown RBP9.01□□□□□ -0.97
SSR1-210ENST00000489567 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 JAKMIP3Q5VZ66 844 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 IQSEC1Q6DN90 963 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 CCDC62Q6P9F0 684 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 ORC3Q9UBD5 711 aaPredicted RBP9.01□□□□□ -0.97
SSR1-210ENST00000489567 KCNJ14Q9UNX9 436 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 DNAH12Q6ZR08 3092 aa9.01□□□□□ -0.97
SSR1-210ENST00000489567 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
SSR1-210ENST00000489567 B4DLN1 442 aa9□□□□□ -0.97
SSR1-210ENST00000489567 ST18O60284 1047 aa9□□□□□ -0.97
SSR1-210ENST00000489567 COL6A1P12109 1028 aa9□□□□□ -0.97
SSR1-210ENST00000489567 CCND2P30279 289 aa9□□□□□ -0.97
SSR1-210ENST00000489567 BEX3Q00994 111 aa9□□□□□ -0.97
SSR1-210ENST00000489567 DUSP28Q4G0W2 176 aa9□□□□□ -0.97
SSR1-210ENST00000489567 PCNX4Q63HM2 1172 aa9□□□□□ -0.97
SSR1-210ENST00000489567 CCSAPQ6IQ19 270 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 TLK2Q86UE8 772 aa9□□□□□ -0.97
SSR1-210ENST00000489567 ANKLE1Q8NAG6 615 aa9□□□□□ -0.97
SSR1-210ENST00000489567 KLHDC9Q8NEP7 349 aa9□□□□□ -0.97
SSR1-210ENST00000489567 SCFD2Q8WU76 684 aa9□□□□□ -0.97
SSR1-210ENST00000489567 MPHOSPH6Q99547 160 aaKnown RBP9□□□□□ -0.97
SSR1-210ENST00000489567 ANO3Q9BYT9 981 aa9□□□□□ -0.97
SSR1-210ENST00000489567 UPF3AQ9H1J1 476 aaKnown RBP9□□□□□ -0.97
SSR1-210ENST00000489567 BCAS3Q9H6U6 928 aa9□□□□□ -0.97
SSR1-210ENST00000489567 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 DNM1LO00429 736 aa9□□□□□ -0.97
SSR1-210ENST00000489567 DYNC1LI2O43237 492 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 EDIL3O43854 480 aa9□□□□□ -0.97
SSR1-210ENST00000489567 C6orf222P0C671 652 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 TXNP10599 105 aaKnown RBP9□□□□□ -0.97
SSR1-210ENST00000489567 ITGB5P18084 799 aa9□□□□□ -0.97
SSR1-210ENST00000489567 FOSBP53539 338 aa9□□□□□ -0.97
SSR1-210ENST00000489567 GJA9P57773 515 aa9□□□□□ -0.97
SSR1-210ENST00000489567 NLRP5P59047 1200 aa9□□□□□ -0.97
SSR1-210ENST00000489567 SP2Q02086 613 aa9□□□□□ -0.97
SSR1-210ENST00000489567 SEMA3FQ13275 785 aa9□□□□□ -0.97
SSR1-210ENST00000489567 ARRDC4Q8NCT1 418 aa9□□□□□ -0.97
SSR1-210ENST00000489567 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 TMX3Q96JJ7 454 aa9□□□□□ -0.97
SSR1-210ENST00000489567 ZSCAN31Q96LW9 406 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 INPP4AQ96PE3 977 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 ALG1Q9BT22 464 aa9□□□□□ -0.97
SSR1-210ENST00000489567 C6orf50Q9HD87 102 aa9□□□□□ -0.97
SSR1-210ENST00000489567 SH3GLB2Q9NR46 395 aa9□□□□□ -0.97
SSR1-210ENST00000489567 SH2B1Q9NRF2 756 aaPredicted RBP9□□□□□ -0.97
SSR1-210ENST00000489567 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
SSR1-210ENST00000489567 M0R2N6 131 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 SORBS3O60504 671 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 GNA11P29992 359 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 NKX3-2P78367 333 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 TTLL4Q14679 1199 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 KCNA10Q16322 511 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 REXO1Q8N1G1 1221 aaKnown RBP8.99□□□□□ -0.97
SSR1-210ENST00000489567 CCDC148Q8NFR7 591 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 CYP2W1Q8TAV3 490 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 CRYGNQ8WXF5 182 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 FERMT2Q96AC1 680 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 PHF20Q9BVI0 1012 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 C11orf49Q9H6J7 331 aa8.99□□□□□ -0.97
SSR1-210ENST00000489567 MRVI1Q9Y6F6 885 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms