RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FOCADQ5VW36 1801 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 IQCA1LA6NCM1 817 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 TMEM88BA6NKF7 163 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 M0R2N6 131 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 PSMD14O00487 310 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 TBX3O15119 743 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 ST8SIA5O15466 376 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 CCP110O43303 1012 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 PPFIA3O75145 1194 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 KIF20AO95235 890 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 AVPP01185 164 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 TUBB4AP04350 444 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 OR52Z1P0C646 297 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 JUNDP17535 347 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 ATP2B1P20020 1258 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 SSTR3P32745 418 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-208ENST00000489537 MYL5Q02045 173 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 MAP3K10Q02779 954 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 SPAG1Q07617 926 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 SEPT2Q15019 361 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 TPRNQ4KMQ1 711 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 USP17L2Q6R6M4 530 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 RETREG3Q86VR2 466 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 DRC7Q8IY82 874 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 CMTR1Q8N1G2 835 aaKnown RBP7.18□□□□□ -1.26
SF3A3-208ENST00000489537 STAG2Q8N3U4 1231 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 LPAR1Q92633 364 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 HLA-CQ95604 372 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 FTOQ9C0B1 505 aaKnown RBP eCLIP7.18□□□□□ -1.26
SF3A3-208ENST00000489537 NT5C3AQ9H0P0 336 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 PSTPIP2Q9H939 334 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 STK17AQ9UEE5 414 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 PCDHA6Q9UN73 950 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 SCAF8Q9UPN6 1271 aaKnown RBP7.18□□□□□ -1.26
SF3A3-208ENST00000489537 ZKSCAN5Q9Y2L8 839 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 PCDHA8Q9Y5H6 950 aa7.18□□□□□ -1.26
SF3A3-208ENST00000489537 MYH1P12882 1939 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 POLR2AP24928 1970 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 VWA3AA6NCI4 1184 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 H7C1D1 291 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 POLR2DO15514 142 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 CYTH3O43739 400 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 MARCH6O60337 910 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 AOC2O75106 756 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 BMP3P12645 472 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 EEF2P13639 858 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 MCM7P33993 719 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 USP14P54578 494 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 WNT7BP56706 349 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF280AP59817 542 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ATP2B2Q01814 1243 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 GUCA2AQ02747 115 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 TCP10Q12799 353 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 NFIAQ12857 509 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 IQCB1Q15051 598 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF174Q15697 407 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 NPY5RQ15761 445 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 RRAGBQ5VZM2 374 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 CYP4F22Q6NT55 531 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 APOBEC3FQ8IUX4 373 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 SLFN12Q8IYM2 578 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ADGRF4Q8IZF3 695 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 SPATA20Q8TB22 786 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ENOX1Q8TC92 643 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 NOC3LQ8WTT2 800 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF775Q96BV0 537 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ZBED3Q96IU2 234 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 PIGSQ96S52 555 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 CSRNP2Q9H175 543 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 DNAJC25Q9H1X3 360 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 TDRD3Q9H7E2 651 aaKnown RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 GJB4Q9NTQ9 266 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 PGAP2Q9UHJ9 254 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 TMX2Q9Y320 296 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 PCDHA1Q9Y5I3 950 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 KDM3AQ9Y4C1 1321 aa7.17□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF646O15015 1829 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-208ENST00000489537 DDTLA6NHG4 134 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 SPDYE3A6NKU9 549 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 F5H6K3 240 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 ZNF500O60304 480 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 CCNT1O60563 726 aaKnown RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 CTNND1O60716 968 aaKnown RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 FGFR1OPO95684 399 aaKnown RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 TPM2P07951 284 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 STAT6P42226 847 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 SARSP49591 514 aaKnown RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 STAT2P52630 851 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 KLRC3Q07444 240 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 IKQ13123 557 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-208ENST00000489537 KCNB1Q14721 858 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 CALCRLQ16602 461 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 SLC4A8Q2Y0W8 1093 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 LONRF3Q496Y0 759 aa7.16□□□□□ -1.26
SF3A3-208ENST00000489537 FILIP1LQ4L180 1135 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms