RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PPP1R18Q6NYC8 613 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 AIFM3Q96NN9 605 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 SPC25Q9HBM1 224 aa14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 MAP3K20Q9NYL2 800 aaKnown RBP14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 ZMYND8Q9ULU4 1186 aaPredicted RBP14.1□□□□□ -0.15
SMARCD3-213ENST00000489503 SMCO2A6NFE2 343 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 CPLX1O14810 134 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 EVI5O60447 810 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 ASGR1P07306 291 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 CST5P28325 142 aaPredicted RBP14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 RTP1P59025 263 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 MRPS9P82933 396 aaKnown RBP14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 AKAP17AQ02040 695 aaKnown RBP14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 TTLL4Q14679 1199 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 TRIM60Q495X7 471 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 VSIG10LQ86VR7 867 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 SAMD3Q8N6K7 520 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 RNF26Q9BY78 433 aaPredicted RBP14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 ALDH8A1Q9H2A2 487 aaPredicted RBP14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 SLKQ9H2G2 1235 aaPredicted RBP14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 RIC8AQ9NPQ8 531 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 RTEL1Q9NZ71 1219 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 MRVI1Q9Y6F6 885 aa14.09□□□□□ -0.15
SMARCD3-213ENST00000489503 hCG_1984214I3L0E3 225 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 PFKFB2O60825 505 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 EIF3JO75822 258 aaKnown RBP14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 SYN1P17600 705 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 ARHGAP1Q07960 439 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 ST3GAL1Q11201 340 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 ME3Q16798 604 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 CXCL17Q6UXB2 119 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 SLC39A5Q6ZMH5 540 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 ZNF713Q8N859 430 aaPredicted RBP14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 RASGRP4Q8TDF6 673 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 PPP1R13LQ8WUF5 828 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 STARD7Q9NQZ5 370 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 PCDHA6Q9UN73 950 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 PCDHA8Q9Y5H6 950 aa14.08□□□□□ -0.16
SMARCD3-213ENST00000489503 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 CTDNEP1O95476 244 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 MYL3P08590 195 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 UBA1P22314 1058 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 PSMC6P62333 389 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 SEMA3FQ13275 785 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 ANKRD1Q15327 319 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 PRPF38BQ5VTL8 546 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 JAKMIP3Q5VZ66 844 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 TRIM22Q8IYM9 498 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 TSEN34Q9BSV6 310 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 ANO3Q9BYT9 981 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 BCAS3Q9H6U6 928 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 DDX41Q9UJV9 622 aaKnown RBP14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 MYH7BA7E2Y1 1941 aa14.07□□□□□ -0.16
SMARCD3-213ENST00000489503 MOXD2PA6NHM9 499 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 PQBP1O60828 265 aaKnown RBP14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 GH1P01241 217 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 RBM25P49756 843 aaKnown RBP14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 NKX3-2P78367 333 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 SP2Q02086 613 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 SNX17Q15036 470 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 PCNX4Q63HM2 1172 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 PCSK9Q8NBP7 692 aaKnown RBP14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 AFG1LQ8WV93 481 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 GTF3C6Q969F1 213 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 GJB4Q9NTQ9 266 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 RBM27Q9P2N5 1060 aaKnown RBP14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 Q9Y3F1 56 aa14.06□□□□□ -0.16
SMARCD3-213ENST00000489503 ESYT2A0FGR8 921 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 NKRFO15226 690 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 JAK2O60674 1132 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 DEXIO95424 95 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 GGPS1O95749 300 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 CLK2P49760 499 aaKnown RBP14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 FOSBP53539 338 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 TLE2Q04725 743 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 CPLX2Q6PUV4 134 aaKnown RBP14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 GLT1D1Q96MS3 346 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 INPP4AQ96PE3 977 aaPredicted RBP14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 PRDM5Q9NQX1 630 aaPredicted RBP14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 TELO2Q9Y4R8 837 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 NR2E3Q9Y5X4 410 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 LTBP2Q14767 1821 aa14.05□□□□□ -0.16
SMARCD3-213ENST00000489503 MMP3P08254 477 aa14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 CPT1AP50416 773 aa14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 REXO1Q8N1G1 1221 aaKnown RBP14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 NSUN7Q8NE18 718 aaKnown RBP14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 CCDC12Q8WUD4 166 aaPredicted RBP14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 ZMYND12Q9H0C1 365 aa14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 UPF2Q9HAU5 1272 aaKnown RBP14.04□□□□□ -0.16
SMARCD3-213ENST00000489503 C6orf50Q9HD87 102 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms