RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 EEPD1Q7L9B9 569 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 VSIG10LQ86VR7 867 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 RTEL1Q9NZ71 1219 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 HTTP42858 3142 aa16.21■□□□□ 0.19
CLDN11-209ENST00000489485 ADCY3O60266 1144 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 ELNP15502 786 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 CYP2C19P33261 490 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 MAMDC4Q6UXC1 1216 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 TRIB2Q92519 343 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 LOC102724159A0A0B4J2E5 919 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 CCNT1O60563 726 aaKnown RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 EDNRBP24530 442 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 USP11P51784 963 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 MRPS9P82933 396 aaKnown RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 OLFML2BQ68BL8 750 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 CRYGNQ8WXF5 182 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
CLDN11-209ENST00000489485 PTCH2Q9Y6C5 1203 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 MYH15Q9Y2K3 1946 aa16.2■□□□□ 0.18
CLDN11-209ENST00000489485 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
CLDN11-209ENST00000489485 EIF3JO75822 258 aaKnown RBP16.19■□□□□ 0.18
CLDN11-209ENST00000489485 NCLP19338 710 aaKnown RBP16.19■□□□□ 0.18
CLDN11-209ENST00000489485 CEBPZQ03701 1054 aaKnown RBP16.19■□□□□ 0.18
CLDN11-209ENST00000489485 CTU1Q7Z7A3 348 aaKnown RBP16.19■□□□□ 0.18
CLDN11-209ENST00000489485 TRMT44Q8IYL2 757 aaKnown RBP16.19■□□□□ 0.18
CLDN11-209ENST00000489485 CNPY2Q9Y2B0 182 aa16.19■□□□□ 0.18
CLDN11-209ENST00000489485 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
CLDN11-209ENST00000489485 KIAA1217Q5T5P2 1943 aa16.19■□□□□ 0.18
CLDN11-209ENST00000489485 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 SNAI1O95863 264 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-209ENST00000489485 CYP3A4P08684 503 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-209ENST00000489485 NBR1Q14596 966 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 MFSD14CQ5VZR4 134 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 XRRA1Q6P2D8 792 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 FBXO16Q8IX29 292 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-209ENST00000489485 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 FTOQ9C0B1 505 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLDN11-209ENST00000489485 ABHD16BQ9H3Z7 469 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 FAM86B1E9PN63 330 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 EDIL3O43854 480 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 STAM2O75886 525 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 BAG4O95429 457 aaKnown RBP16.18■□□□□ 0.18
CLDN11-209ENST00000489485 TDP2O95551 362 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 FAM86B2P0C5J1 330 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 SEPT14Q6ZU15 432 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 MORC4Q8TE76 937 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 PXYLP1Q8TE99 480 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 USP28Q96RU2 1077 aa16.18■□□□□ 0.18
CLDN11-209ENST00000489485 WNT7AO00755 349 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 ITGB5P18084 799 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 GRK4P32298 578 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 TRAPPC10P48553 1259 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 PRR16Q569H4 304 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 TTC38Q5R3I4 469 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 PRAMEF19Q5SWL8 479 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 SLAIN1Q8ND83 568 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 MXRA8Q9BRK3 442 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 WDR11Q9BZH6 1224 aa16.17■□□□□ 0.18
CLDN11-209ENST00000489485 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
CLDN11-209ENST00000489485 HMGCRP04035 888 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 MCM7P33993 719 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 KRT85P78386 507 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 MTMR1Q13613 665 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 ZNF174Q15697 407 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 NLRX1Q86UT6 975 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 ZNF396Q96N95 335 aaPredicted RBP16.16■□□□□ 0.18
CLDN11-209ENST00000489485 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
CLDN11-209ENST00000489485 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 DDX25Q9UHL0 483 aaKnown RBP16.16■□□□□ 0.18
CLDN11-209ENST00000489485 PCDHB6Q9Y5E3 794 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 RGS20O76081 388 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
CLDN11-209ENST00000489485 CIITAP33076 1130 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 TRIM32Q13049 653 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 PPP4R3AQ6IN85 833 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 PLA2G4DQ86XP0 818 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 INPP4AQ96PE3 977 aaPredicted RBP16.16■□□□□ 0.18
CLDN11-209ENST00000489485 GBP4Q96PP9 640 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 CFAP45Q9UL16 551 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 UBIAD1Q9Y5Z9 338 aa16.16■□□□□ 0.18
CLDN11-209ENST00000489485 IGLV3-22A0A075B6J6 115 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 CYP3A7-CYP3A51PA0A087WV96 503 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 MEIS1O00470 390 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 FIBPO43427 364 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 SLC37A4O43826 429 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 IGHA2P01877 340 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 CYP3A7P24462 503 aa16.15■□□□□ 0.18
CLDN11-209ENST00000489485 CACNB2Q08289 660 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms