RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 GLT1D1Q96MS3 346 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 SLC26A6Q9BXS9 759 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 STARD7Q9NQZ5 370 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 BARHL2Q9NY43 387 aa18.1■□□□□ 0.49
LMX1A-204ENST00000489443 ZMYND8Q9ULU4 1186 aaPredicted RBP18.1■□□□□ 0.49
LMX1A-204ENST00000489443 hCG_1984214I3L0E3 225 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 CPLX1O14810 134 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 ZEB2O60315 1214 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 IFNAR1P17181 557 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 SYN1P17600 705 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 NEK4P51957 841 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 PFKFB3Q16875 520 aaPredicted RBP18.09■□□□□ 0.49
LMX1A-204ENST00000489443 PPP1R18Q6NYC8 613 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 ZNF713Q8N859 430 aaPredicted RBP18.09■□□□□ 0.49
LMX1A-204ENST00000489443 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 ALDH8A1Q9H2A2 487 aaPredicted RBP18.09■□□□□ 0.49
LMX1A-204ENST00000489443 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
LMX1A-204ENST00000489443 MRVI1Q9Y6F6 885 aa18.09■□□□□ 0.49
LMX1A-204ENST00000489443 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.49
LMX1A-204ENST00000489443 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.49
LMX1A-204ENST00000489443 SMCO2A6NFE2 343 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 SPDYE3A6NKU9 549 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 RGS20O76081 388 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 ADCY7P51828 1080 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 AK2P54819 239 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 ANKRD1Q15327 319 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 TRIM60Q495X7 471 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 CXCL17Q6UXB2 119 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 RIC8AQ9NPQ8 531 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.48
LMX1A-204ENST00000489443 ELP1O95163 1332 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 GH1P01241 217 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 MYL3P08590 195 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 CPT1AP50416 773 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 MRPS9P82933 396 aaKnown RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 TLE2Q04725 743 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 SSRP1Q08945 709 aaKnown RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 SNX17Q15036 470 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 PKN1Q16512 942 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 BRDTQ58F21 947 aaPredicted RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 CPLX2Q6PUV4 134 aaKnown RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 TRIM22Q8IYM9 498 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 SLKQ9H2G2 1235 aaPredicted RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
LMX1A-204ENST00000489443 TPCN1Q9ULQ1 816 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 PCDHA6Q9UN73 950 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 PCDHA8Q9Y5H6 950 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
LMX1A-204ENST00000489443 RANBP2P49792 3224 aaKnown RBP18.06■□□□□ 0.48
LMX1A-204ENST00000489443 SORBS3O60504 671 aa18.06■□□□□ 0.48
LMX1A-204ENST00000489443 PQBP1O60828 265 aaKnown RBP18.06■□□□□ 0.48
LMX1A-204ENST00000489443 C1orf53Q5VUE5 145 aa18.06■□□□□ 0.48
LMX1A-204ENST00000489443 PCNX4Q63HM2 1172 aa18.06■□□□□ 0.48
LMX1A-204ENST00000489443 PCDH10Q9P2E7 1040 aa18.06■□□□□ 0.48
LMX1A-204ENST00000489443 A6NJR5 290 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 PFKFB2O60825 505 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 STAM2O75886 525 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 CABYRO75952 493 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 ARHGAP1Q07960 439 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 GNPTABQ3T906 1256 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 XRRA1Q6P2D8 792 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 KCNV1Q6PIU1 500 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 DHX37Q8IY37 1157 aaKnown RBP18.05■□□□□ 0.48
LMX1A-204ENST00000489443 CCDC12Q8WUD4 166 aaPredicted RBP18.05■□□□□ 0.48
LMX1A-204ENST00000489443 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 PGBD1Q96JS3 809 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 EHMT1Q9H9B1 1298 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 PRDM5Q9NQX1 630 aaPredicted RBP18.05■□□□□ 0.48
LMX1A-204ENST00000489443 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
LMX1A-204ENST00000489443 A0A0U1RQG5 324 aaPredicted RBP18.04■□□□□ 0.48
LMX1A-204ENST00000489443 FOSP01100 380 aaPredicted RBP18.04■□□□□ 0.48
LMX1A-204ENST00000489443 TGFB3P10600 412 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 PSMC6P62333 389 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 SP2Q02086 613 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 SCRN1Q12765 414 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 INPP4AQ96PE3 977 aaPredicted RBP18.04■□□□□ 0.48
LMX1A-204ENST00000489443 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 TMEM260Q9NX78 707 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 PRKAG2Q9UGJ0 569 aa18.04■□□□□ 0.48
LMX1A-204ENST00000489443 TRIOBPQ9H2D6 2365 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 DCDC2CA8MYV0 355 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 ARVCFO00192 962 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 GGPS1O95749 300 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 PURAQ00577 322 aaKnown RBP18.03■□□□□ 0.48
LMX1A-204ENST00000489443 LAMC2Q13753 1193 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 JAKMIP3Q5VZ66 844 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 TEX2Q8IWB9 1127 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 ZMYND12Q9H0C1 365 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 VPS54Q9P1Q0 977 aa18.03■□□□□ 0.48
LMX1A-204ENST00000489443 ESYT2A0FGR8 921 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 SPATA31C2B4DYI2 1134 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 KPNA6O60684 536 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 DTNBO60941 627 aa18.02■□□□□ 0.48
LMX1A-204ENST00000489443 CDKL5O76039 1030 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms