RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 DDX41Q9UJV9 622 aaKnown RBP21.92■■□□□ 1.1
MRPL55-230ENST00000489430 GRIN2DO15399 1336 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 CCDC196A0A1B0GTZ2 297 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 TIMP1P01033 207 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 FGD1P98174 961 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 RTN1Q16799 776 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 PIBF1Q8WXW3 757 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 JAKMIP1Q96N16 626 aaKnown RBP21.91■■□□□ 1.1
MRPL55-230ENST00000489430 BRPF3Q9ULD4 1205 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 MRVI1Q9Y6F6 885 aa21.91■■□□□ 1.1
MRPL55-230ENST00000489430 MYH6P13533 1939 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 ARHGAP1Q07960 439 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 LAMC2Q13753 1193 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 FCHSD1Q86WN1 690 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 SMARCC2Q8TAQ2 1214 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 TCEANC2Q96MN5 208 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 AGXT2Q9BYV1 514 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 PSTPIP2Q9H939 334 aa21.9■■□□□ 1.1
MRPL55-230ENST00000489430 KLF18A0A0U1RQI7 1052 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 hCG_1984214I3L0E3 225 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 MEIS2O14770 477 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 RGS20O76081 388 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 SUPT20HL2P0C7V6 817 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 MYCLP12524 364 aaPredicted RBP21.89■■□□□ 1.09
MRPL55-230ENST00000489430 ITGB8P26012 769 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 PTPN11Q06124 597 aaPredicted RBP21.89■■□□□ 1.09
MRPL55-230ENST00000489430 FUT2Q10981 343 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 LY6KQ17RY6 165 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 GNPTABQ3T906 1256 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 NFRKBQ6P4R8 1299 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 CMTR1Q8N1G2 835 aaKnown RBP21.89■■□□□ 1.09
MRPL55-230ENST00000489430 ZNF713Q8N859 430 aaPredicted RBP21.89■■□□□ 1.09
MRPL55-230ENST00000489430 COPS5Q92905 334 aa21.89■■□□□ 1.09
MRPL55-230ENST00000489430 EIF5BO60841 1220 aaKnown RBP21.88■■□□□ 1.09
MRPL55-230ENST00000489430 MYL3P08590 195 aa21.88■■□□□ 1.09
MRPL55-230ENST00000489430 CASTP20810 708 aaKnown RBP21.88■■□□□ 1.09
MRPL55-230ENST00000489430 RPS6KB1P23443 525 aa21.88■■□□□ 1.09
MRPL55-230ENST00000489430 MFSD5Q6N075 450 aa21.88■■□□□ 1.09
MRPL55-230ENST00000489430 PPP1R18Q6NYC8 613 aa21.88■■□□□ 1.09
MRPL55-230ENST00000489430 PPTC7Q8NI37 304 aa21.88■■□□□ 1.09
MRPL55-230ENST00000489430 USP26Q9BXU7 913 aa21.88■■□□□ 1.09
MRPL55-230ENST00000489430 ALDH8A1Q9H2A2 487 aaPredicted RBP21.88■■□□□ 1.09
MRPL55-230ENST00000489430 NID2Q14112 1375 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 CNTNAP5Q8WYK1 1306 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 GOLGA8AA7E2F4 631 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 GOLGA8BA8MQT2 603 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 ICAM3P32942 547 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 FPGSQ05932 587 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 DGKDQ16760 1214 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 PCNX4Q63HM2 1172 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 Q6ZUG5 572 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 RAB11FIP4Q86YS3 637 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 CCDC82Q8N4S0 544 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 IL31RAQ8NI17 732 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 AFG1LQ8WV93 481 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 INPP4AQ96PE3 977 aaPredicted RBP21.87■■□□□ 1.09
MRPL55-230ENST00000489430 TM6SF1Q9BZW5 370 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 LTBP2Q14767 1821 aa21.87■■□□□ 1.09
MRPL55-230ENST00000489430 BAZ2BQ9UIF8 2168 aaKnown RBP21.87■■□□□ 1.09
MRPL55-230ENST00000489430 MMP3P08254 477 aa21.86■■□□□ 1.09
MRPL55-230ENST00000489430 HOXD8P13378 290 aaPredicted RBP21.86■■□□□ 1.09
MRPL55-230ENST00000489430 EVCP57679 992 aa21.86■■□□□ 1.09
MRPL55-230ENST00000489430 PSMC6P62333 389 aa21.86■■□□□ 1.09
MRPL55-230ENST00000489430 USP17L6PQ6QN14 398 aa21.86■■□□□ 1.09
MRPL55-230ENST00000489430 DHX37Q8IY37 1157 aaKnown RBP21.86■■□□□ 1.09
MRPL55-230ENST00000489430 TMEM199Q8N511 208 aa21.86■■□□□ 1.09
MRPL55-230ENST00000489430 GLT8D2Q9H1C3 349 aa21.86■■□□□ 1.09
MRPL55-230ENST00000489430 FAM217BQ9NTX9 383 aaPredicted RBP21.86■■□□□ 1.09
MRPL55-230ENST00000489430 PPFIA4O75335 1185 aa21.85■■□□□ 1.09
MRPL55-230ENST00000489430 METAP2P50579 478 aaKnown RBP eCLIP21.85■■□□□ 1.09
MRPL55-230ENST00000489430 MRPS9P82933 396 aaKnown RBP21.85■■□□□ 1.09
MRPL55-230ENST00000489430 PPIGQ13427 754 aaKnown RBP eCLIP21.85■■□□□ 1.091e-6■■■■□ 24.6
MRPL55-230ENST00000489430 CELF3Q5SZQ8 465 aaKnown RBP21.85■■□□□ 1.09
MRPL55-230ENST00000489430 MYSM1Q5VVJ2 828 aa21.85■■□□□ 1.09
MRPL55-230ENST00000489430 HEATR3Q7Z4Q2 680 aa21.85■■□□□ 1.09
MRPL55-230ENST00000489430 BRF1Q92994 677 aa21.85■■□□□ 1.09
MRPL55-230ENST00000489430 ZSWIM6Q9HCJ5 1215 aa21.85■■□□□ 1.09
MRPL55-230ENST00000489430 SZT2Q5T011 3432 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 SOX1O00570 391 aaPredicted RBP21.84■■□□□ 1.09
MRPL55-230ENST00000489430 B4GALT4O60513 344 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 NBPF20Q3BBV1 942 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 RUFY3Q7L099 469 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 SESTD1Q86VW0 696 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 SENP7Q9BQF6 1050 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 KATNAL1Q9BW62 490 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 HIPK3Q9H422 1215 aa21.84■■□□□ 1.09
MRPL55-230ENST00000489430 V9GY48 417 aaPredicted RBP21.84■■□□□ 1.09
MRPL55-230ENST00000489430 SPDYE3A6NKU9 549 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 SPATA31C2B4DYI2 1134 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 FIBPO43427 364 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 CPA1P15085 419 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 UBA1P22314 1058 aaKnown RBP21.83■■□□□ 1.09
MRPL55-230ENST00000489430 CDC27P30260 824 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 APOBRQ0VD83 1088 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 NEDD9Q14511 834 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 SHHQ15465 462 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 CDHR1Q96JP9 859 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 TRPV6Q9H1D0 765 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 EHMT1Q9H9B1 1298 aa21.83■■□□□ 1.09
MRPL55-230ENST00000489430 BARHL2Q9NY43 387 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms