RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 ASGR2P07307 311 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 NAT2P11245 290 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 TRIM26Q12899 539 aaPredicted RBP5.79□□□□□ -1.48
CBWD1-216ENST00000489272 CPNE8Q86YQ8 564 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 NETO2Q8NC67 525 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 TSPAN17Q96FV3 270 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 PEX11GQ96HA9 241 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 TGIF2Q9GZN2 237 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 INPP5FQ9Y2H2 1132 aa5.79□□□□□ -1.48
CBWD1-216ENST00000489272 NPHS1O60500 1241 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 PPFIA2O75334 1257 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 ATF2P15336 505 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 MC3RP41968 323 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 ZNF143P52747 638 aaPredicted RBP5.78□□□□□ -1.48
CBWD1-216ENST00000489272 SLC9A5Q14940 896 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 POMZP3Q6PJE2 187 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 LIMS2Q7Z4I7 341 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 USP33Q8TEY7 942 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 IKZF4Q9H2S9 585 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 CCSER2Q9H7U1 834 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 RXFP1Q9HBX9 757 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 GULP1Q9UBP9 304 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 FBLN5Q9UBX5 448 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 APEX2Q9UBZ4 518 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 AKT3Q9Y243 479 aa5.78□□□□□ -1.48
CBWD1-216ENST00000489272 PMLP29590 882 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 WWC2Q6AWC2 1192 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 B3GNT8Q7Z7M8 397 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 FAM169BQ8N8A8 192 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 BVESQ8NE79 360 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 ANAPC16Q96DE5 110 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 APBA2Q99767 749 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 MTA3Q9BTC8 594 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 ACBD3Q9H3P7 528 aa5.77□□□□□ -1.49
CBWD1-216ENST00000489272 C7orf72A4D263 438 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 NOP56O00567 594 aaKnown RBP5.76□□□□□ -1.49
CBWD1-216ENST00000489272 KCNH1O95259 989 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 ZBTB7AO95365 584 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 SARSP49591 514 aaKnown RBP5.76□□□□□ -1.49
CBWD1-216ENST00000489272 ICAM4Q14773 271 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 NCAPHQ15003 741 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 CD248Q9HCU0 757 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.76□□□□□ -1.49
CBWD1-216ENST00000489272 CLEC1BQ9P126 229 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 KIAA1522Q9P206 1035 aaPredicted RBP5.76□□□□□ -1.49
CBWD1-216ENST00000489272 EMC9Q9Y3B6 208 aa5.76□□□□□ -1.49
CBWD1-216ENST00000489272 ZNF536O15090 1300 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 PLS3P13797 630 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 DPTQ07507 201 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 SCRN1Q12765 414 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 HOMEZQ8IX15 550 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 PALM2Q8IXS6 379 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 ZNF513Q8N8E2 541 aaPredicted RBP5.75□□□□□ -1.49
CBWD1-216ENST00000489272 CPA5Q8WXQ8 436 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 COPS5Q92905 334 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 PPP1R14AQ96A00 147 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 MMP19Q99542 508 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 ZNF341Q9BYN7 854 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 BCAS3Q9H6U6 928 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 INVSQ9Y283 1065 aa5.75□□□□□ -1.49
CBWD1-216ENST00000489272 PPP1R11O60927 126 aaPredicted RBP5.74□□□□□ -1.49
CBWD1-216ENST00000489272 FUCA1P04066 466 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 NTRK1P04629 796 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 BHLHA9Q7RTU4 235 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 DCP2Q8IU60 420 aaKnown RBP5.74□□□□□ -1.49
CBWD1-216ENST00000489272 LGI4Q8N135 537 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 SMARCC2Q8TAQ2 1214 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 AP5M1Q9H0R1 490 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 GPRC5CQ9NQ84 441 aa5.74□□□□□ -1.49
CBWD1-216ENST00000489272 UNCXA6NJT0 531 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 NPIPB8E9PQR5 432 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 THBDP07204 575 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 CACNB2Q08289 660 aaPredicted RBP5.73□□□□□ -1.49
CBWD1-216ENST00000489272 MBLAC2Q68D91 279 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 GTF2IRD2BQ6EKJ0 949 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 GTF2IRD2Q86UP8 949 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 TRIM59Q8IWR1 403 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 MARCH2Q9P0N8 246 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 NTMQ9P121 344 aa5.73□□□□□ -1.49
CBWD1-216ENST00000489272 ATF4P18848 351 aaPredicted RBP5.72□□□□□ -1.49
CBWD1-216ENST00000489272 DPY19L2P1Q6NXN4 242 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 AMER2Q8N7J2 671 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 PLEKHO2Q8TD55 490 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 CRAMP1Q96RY5 1269 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 NKX2-4Q9H2Z4 354 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 CAPN10Q9HC96 672 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 CYP26B1Q9NR63 512 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 BTG4Q9NY30 223 aa5.72□□□□□ -1.49
CBWD1-216ENST00000489272 CYP2C8P10632 490 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 R3HDM1Q15032 1099 aaKnown RBP5.71□□□□□ -1.5
CBWD1-216ENST00000489272 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 TNNI3KQ59H18 835 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 IQCEQ6IPM2 695 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 ETV3LQ6ZN32 361 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 ADAMTS17Q8TE56 1095 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 ZBTB8AQ96BR9 441 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 MRGPRX3Q96LB0 322 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 ACTR10Q9NZ32 417 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 SIT1Q9Y3P8 196 aa5.71□□□□□ -1.5
CBWD1-216ENST00000489272 C22orf46C9J442 243 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms