RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-213	ENST00000489215	TMEM63B	Q5T3F8	832 aa		27.65	■■■□□ 2.02
PTPN18-213	ENST00000489215	ZNF713	Q8N859	430 aa	Predicted RBP	27.65	■■■□□ 2.02
PTPN18-213	ENST00000489215	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.65	■■■□□ 2.02
PTPN18-213	ENST00000489215	MRVI1	Q9Y6F6	885 aa		27.65	■■■□□ 2.02
PTPN18-213	ENST00000489215	RAG1	P15918	1043 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	FAAP100	Q0VG06	881 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	XRRA1	Q6P2D8	792 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	TDH	Q8IZJ6	230 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	SLC43A3	Q8NBI5	491 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	BRF1	Q92994	677 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	MTG1	Q9BT17	334 aa	Predicted RBP	27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	AGXT2	Q9BYV1	514 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	TM6SF1	Q9BZW5	370 aa		27.64	■■■□□ 2.02
PTPN18-213	ENST00000489215	METAP2	P50579	478 aa	Known RBP eCLIP	27.63	■■■□□ 2.01
PTPN18-213	ENST00000489215	GNPTAB	Q3T906	1256 aa		27.63	■■■□□ 2.01
PTPN18-213	ENST00000489215	RUFY3	Q7L099	469 aa		27.63	■■■□□ 2.01
PTPN18-213	ENST00000489215	DDX41	Q9UJV9	622 aa	Known RBP	27.63	■■■□□ 2.01
PTPN18-213	ENST00000489215	CYP46A1	Q9Y6A2	500 aa		27.63	■■■□□ 2.01
PTPN18-213	ENST00000489215	ARIH2	O95376	493 aa		27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	MYL3	P08590	195 aa		27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	PURA	Q00577	322 aa	Known RBP	27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	LAMC2	Q13753	1193 aa		27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	EMID1	Q96A84	441 aa	Predicted RBP	27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	GLT8D2	Q9H1C3	349 aa		27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	ZSWIM6	Q9HCJ5	1215 aa		27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	FRMPD4	Q14CM0	1322 aa		27.62	■■■□□ 2.01
PTPN18-213	ENST00000489215	TRIM43B	A6NCK2	446 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	MEIS2	O14770	477 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	CPA1	P15085	419 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	FXR1	P51114	621 aa	Known RBP eCLIP	27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	APOBR	Q0VD83	1088 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	LY6K	Q17RY6	165 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	PPP1R18	Q6NYC8	613 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	HEATR3	Q7Z4Q2	680 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	SH3RF1	Q7Z6J0	888 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	FAM126B	Q8IXS8	530 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	TRIM43	Q96BQ3	446 aa	Predicted RBP	27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	CNTNAP5	Q8WYK1	1306 aa		27.61	■■■□□ 2.01
PTPN18-213	ENST00000489215	TRIOBP	Q9H2D6	2365 aa		27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	USP17L6P	Q6QN14	398 aa		27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	DHX37	Q8IY37	1157 aa	Known RBP	27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	COPS5	Q92905	334 aa		27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	BAD	Q92934	168 aa		27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	EHMT1	Q9H9B1	1298 aa		27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215		V9GY48	417 aa	Predicted RBP	27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	LTBP2	Q14767	1821 aa		27.6	■■■□□ 2.01
PTPN18-213	ENST00000489215	SUPT20HL2	P0C7V6	817 aa		27.59	■■■□□ 2.01
PTPN18-213	ENST00000489215	PTGS1	P23219	599 aa		27.59	■■■□□ 2.01
PTPN18-213	ENST00000489215	EVC	P57679	992 aa		27.59	■■■□□ 2.01
PTPN18-213	ENST00000489215	ARHGAP1	Q07960	439 aa		27.59	■■■□□ 2.01
PTPN18-213	ENST00000489215	FUT2	Q10981	343 aa		27.59	■■■□□ 2.01
PTPN18-213	ENST00000489215	PCNX4	Q63HM2	1172 aa		27.59	■■■□□ 2.01
PTPN18-213	ENST00000489215	SPDYE3	A6NKU9	549 aa		27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	TIMP1	P01033	207 aa		27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	CD4	P01730	458 aa		27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	PTPN11	Q06124	597 aa	Predicted RBP	27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	DGKD	Q16760	1214 aa		27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	FAM217B	Q9NTX9	383 aa	Predicted RBP	27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	TBX21	Q9UL17	535 aa		27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	NID2	Q14112	1375 aa		27.58	■■■□□ 2.01
PTPN18-213	ENST00000489215	hCG_1642624	A0A1W2PR95	340 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	RGS20	O76081	388 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	SLC34A2	O95436	690 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	CDC27	P30260	824 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	NAPA	P54920	295 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	LRIT3	Q3SXY7	679 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	NFRKB	Q6P4R8	1299 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	PPTC7	Q8NI37	304 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	AFG1L	Q8WV93	481 aa		27.57	■■■□□ 2
PTPN18-213	ENST00000489215	FOS	P01100	380 aa	Predicted RBP	27.56	■■■□□ 2
PTPN18-213	ENST00000489215	MMP3	P08254	477 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	ICAM3	P32942	547 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	ADD1	P35611	737 aa	Known RBP	27.56	■■■□□ 2
PTPN18-213	ENST00000489215	ANAPC15	P60006	121 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	AKAP17A	Q02040	695 aa	Known RBP	27.56	■■■□□ 2
PTPN18-213	ENST00000489215	NLRX1	Q86UT6	975 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	IL31RA	Q8NI17	732 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.56	■■■□□ 2
PTPN18-213	ENST00000489215	INPP4A	Q96PE3	977 aa	Predicted RBP	27.56	■■■□□ 2
PTPN18-213	ENST00000489215	BARHL2	Q9NY43	387 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	MYH7B	A7E2Y1	1941 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	GRIN2D	O15399	1336 aa		27.56	■■■□□ 2
PTPN18-213	ENST00000489215	FIBP	O43427	364 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	PPFIA4	O75335	1185 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	PSMC6	P62333	389 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	MRPS9	P82933	396 aa	Known RBP	27.55	■■■□□ 2
PTPN18-213	ENST00000489215	NEDD9	Q14511	834 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	CELF3	Q5SZQ8	465 aa	Known RBP	27.55	■■■□□ 2
PTPN18-213	ENST00000489215	MYSM1	Q5VVJ2	828 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	WWC2	Q6AWC2	1192 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	27.55	■■■□□ 2
PTPN18-213	ENST00000489215	CDHR1	Q96JP9	859 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	KATNAL1	Q9BW62	490 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	MLXIP	Q9HAP2	919 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	RIC8A	Q9NPQ8	531 aa		27.55	■■■□□ 2
PTPN18-213	ENST00000489215	FPGS	Q05932	587 aa		27.54	■■■□□ 2
PTPN18-213	ENST00000489215	MCTP2	Q6DN12	878 aa		27.54	■■■□□ 2
PTPN18-213	ENST00000489215	MFSD5	Q6N075	450 aa		27.54	■■■□□ 2
PTPN18-213	ENST00000489215	TMEM199	Q8N511	208 aa		27.54	■■■□□ 2
PTPN18-213	ENST00000489215	GIMAP8	Q8ND71	665 aa	Predicted RBP	27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms