RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CABP7Q86V35 215 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 PLA2G4DQ86XP0 818 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 IGSF22Q8N9C0 903 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
USP11-211ENST00000489111 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 FAM20AQ96MK3 541 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
USP11-211ENST00000489111 PANK2Q9BZ23 570 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
USP11-211ENST00000489111 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
USP11-211ENST00000489111 PXMP2Q9NR77 195 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 ABT1Q9ULW3 272 aaKnown RBP11.3□□□□□ -0.6
USP11-211ENST00000489111 PCDHA12Q9UN75 941 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
USP11-211ENST00000489111 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.29□□□□□ -0.6
USP11-211ENST00000489111 MANSC4A6NHS7 340 aaPredicted RBP11.29□□□□□ -0.6
USP11-211ENST00000489111 PP2D1A8MPX8 630 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
USP11-211ENST00000489111 CNMDO75829 334 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 SLFN14P0C7P3 912 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 ERCC3P19447 782 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 STAT6P42226 847 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 GCLCP48506 637 aaPredicted RBP11.29□□□□□ -0.6
USP11-211ENST00000489111 PDIA5Q14554 519 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
USP11-211ENST00000489111 LONRF3Q496Y0 759 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 WDR78Q5VTH9 848 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 KRT79Q5XKE5 535 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 RBM43Q6ZSC3 357 aaKnown RBP11.29□□□□□ -0.6
USP11-211ENST00000489111 NIPA1Q7RTP0 329 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 ETNPPLQ8TBG4 499 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 HAS1Q92839 578 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 LENG9Q96B70 501 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 CCSER1Q9C0I3 900 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 MROH8Q9H579 483 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 DISC1Q9NRI5 854 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 SERTAD1Q9UHV2 236 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
USP11-211ENST00000489111 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 A0A087X0B3 334 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 POTEMA6NI47 508 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 POTEB2H3BUK9 544 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 MSH4O15457 936 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 PEX10O60683 326 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 GAS7O60861 476 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 SLC10A3P09131 477 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 MYCLP12524 364 aaPredicted RBP11.28□□□□□ -0.6
USP11-211ENST00000489111 CDC25AP30304 524 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 ERVK-24P63145 666 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 TYRO3Q06418 890 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 KCTD2Q14681 263 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 POSTNQ15063 836 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 PGM5Q15124 567 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 LRCH2Q5VUJ6 765 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 RRAGBQ5VZM2 374 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 POTEEQ6S8J3 1075 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 FAM43AQ8N2R8 423 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 GPRC5AQ8NFJ5 357 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 IL31RAQ8NI17 732 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 SNX29Q8TEQ0 813 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 UIMC1Q96RL1 719 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 ZNF577Q9BSK1 485 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 CUEDC2Q9H467 287 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 TXNRD2Q9NNW7 524 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 TCEAL9Q9UHQ7 104 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 A0A0G2JMZ2 1700 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 KDM3AQ9Y4C1 1321 aa11.28□□□□□ -0.6
USP11-211ENST00000489111 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 B4DLN1 442 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 MEIS1O00470 390 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 SLC26A4O43511 780 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 TOMM70O94826 608 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 SMC2O95347 1197 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 BCRP11274 1271 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 PLCG1P19174 1290 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
USP11-211ENST00000489111 SREBF2Q12772 1141 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 MTMR1Q13613 665 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 STX1AQ16623 288 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
USP11-211ENST00000489111 ELOA2Q8IYF1 753 aaPredicted RBP11.27□□□□□ -0.61
USP11-211ENST00000489111 DNERQ8NFT8 737 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 CYP2W1Q8TAV3 490 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 GJA10Q969M2 543 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
USP11-211ENST00000489111 MMP19Q99542 508 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms