RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 TRIM60Q495X7 471 aa17.32■□□□□ 0.36
CYTH3-209ENST00000488964 ZNF274Q96GC6 653 aaPredicted RBP17.32■□□□□ 0.36
CYTH3-209ENST00000488964 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
CYTH3-209ENST00000488964 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
CYTH3-209ENST00000488964 FRMPD4Q14CM0 1322 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 MYADML2A6NDP7 307 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 FOSP01100 380 aaPredicted RBP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 TGFB3P10600 412 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 SCG2P13521 617 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 CDC27P30260 824 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 BEX3Q00994 111 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 WWC2Q6AWC2 1192 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 MCTP2Q6DN12 878 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 CCSAPQ6IQ19 270 aaPredicted RBP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 NLRX1Q86UT6 975 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 VSIG10LQ86VR7 867 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 CCDC148Q8NFR7 591 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 PRDM5Q9NQX1 630 aaPredicted RBP17.31■□□□□ 0.36
CYTH3-209ENST00000488964 BARHL2Q9NY43 387 aa17.31■□□□□ 0.36
CYTH3-209ENST00000488964 PQBP1O60828 265 aaKnown RBP17.3■□□□□ 0.36
CYTH3-209ENST00000488964 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
CYTH3-209ENST00000488964 USP17L6PQ6QN14 398 aa17.3■□□□□ 0.36
CYTH3-209ENST00000488964 CDHR1Q96JP9 859 aa17.3■□□□□ 0.36
CYTH3-209ENST00000488964 MEIS2O14770 477 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 MYL3P08590 195 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 CLTBP09497 229 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 IFNAR1P17181 557 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 GNA11P29992 359 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 CCT2P78371 535 aaKnown RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 SSRP1Q08945 709 aaKnown RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 FUT2Q10981 343 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 AP3B2Q13367 1082 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 TOB2Q14106 344 aaPredicted RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 CXCL17Q6UXB2 119 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 BICD2Q8TD16 824 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 TOX2Q96NM4 488 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 MTG1Q9BT17 334 aaPredicted RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 SLC26A6Q9BXS9 759 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 C6orf50Q9HD87 102 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
CYTH3-209ENST00000488964 FAM217BQ9NTX9 383 aaPredicted RBP17.29■□□□□ 0.36
CYTH3-209ENST00000488964 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 STXBP3O00186 592 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 ARVCFO00192 962 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 FIBPO43427 364 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 SYN1P17600 705 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 TLE2Q04725 743 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 CCDC62Q6P9F0 684 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 ANKRD33Q7Z3H0 272 aa17.28■□□□□ 0.36
CYTH3-209ENST00000488964 ESYT2A0FGR8 921 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 A6NJR5 290 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 CTAGE5O15320 804 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 ITGA7Q13683 1181 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 NEDD9Q14511 834 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 DGKDQ16760 1214 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 LY6KQ17RY6 165 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 GIMAP8Q8ND71 665 aaPredicted RBP17.27■□□□□ 0.36
CYTH3-209ENST00000488964 PPTC7Q8NI37 304 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 EMID1Q96A84 441 aaPredicted RBP17.27■□□□□ 0.36
CYTH3-209ENST00000488964 KATNAL1Q9BW62 490 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
CYTH3-209ENST00000488964 MLXIPQ9HAP2 919 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 TMEM39AQ9NV64 488 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 DDX41Q9UJV9 622 aaKnown RBP17.27■□□□□ 0.36
CYTH3-209ENST00000488964 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.36
CYTH3-209ENST00000488964 A0A1W2PPC1 479 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 NOP56O00567 594 aaKnown RBP17.26■□□□□ 0.35
CYTH3-209ENST00000488964 ARIH2O95376 493 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 XBP1P17861 261 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 PURAQ00577 322 aaKnown RBP17.26■□□□□ 0.35
CYTH3-209ENST00000488964 STK3Q13188 491 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 UBE2SQ16763 222 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
CYTH3-209ENST00000488964 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 COPS5Q92905 334 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 PHKBQ93100 1093 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 INPP4AQ96PE3 977 aaPredicted RBP17.26■□□□□ 0.35
CYTH3-209ENST00000488964 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
CYTH3-209ENST00000488964 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
CYTH3-209ENST00000488964 DEXIO95424 95 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 GGPS1O95749 300 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 MMP3P08254 477 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 RAG1P15918 1043 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 ICAM3P32942 547 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 NEK4P51957 841 aa17.25■□□□□ 0.35
CYTH3-209ENST00000488964 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms