RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ACBD5Q5T8D3 534 aaPredicted RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 PPP4R4Q6NUP7 873 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 USP51Q70EK9 711 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 DGKHQ86XP1 1220 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 SPICE1Q8N0Z3 855 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 MAGEB6Q8N7X4 407 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 FBXO27Q8NI29 283 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 GATAD2BQ8WXI9 593 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 NAP1L4Q99733 375 aaKnown RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 PCED1AQ9H1Q7 454 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 MAP3K20Q9NYL2 800 aaKnown RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 ZNF69Q9UC07 566 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 MBD1Q9UIS9 605 aaPredicted RBP4.35□□□□□ -1.71
PRPF4-203ENST00000488937 KCNH3Q9ULD8 1083 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 SCINQ9Y6U3 715 aa4.35□□□□□ -1.71
PRPF4-203ENST00000488937 SETD1BQ9UPS6 1966 aaKnown RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 KAT6BQ8WYB5 2073 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 FAM83GA6ND36 823 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 ABLIM1O14639 778 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 TBX3O15119 743 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 FZD7O75084 574 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 LMNB1P20700 586 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 MAN1A1P33908 653 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 SRSF3P84103 164 aaKnown RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 PURAQ00577 322 aaKnown RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 FNDC3BQ53EP0 1204 aaKnown RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 CT47A1Q5JQC4 288 aaPredicted RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 EFCAB2Q5VUJ9 269 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 PRAMEF13Q5VWM6 474 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 ERAP2Q6P179 960 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 CNKSR3Q6P9H4 555 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 BNC2Q6ZN30 1099 aaPredicted RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 FAM178BQ8IXR5 827 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 UBR7Q8N806 425 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 ZBTB38Q8NAP3 1195 aaPredicted RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 KISS1RQ969F8 398 aaPredicted RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 E2F7Q96AV8 911 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 FERD3LQ96RJ6 166 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 CRBNQ96SW2 442 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 KIF2CQ99661 725 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 SPATA9Q9BWV2 254 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 GPR62Q9BZJ7 368 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 EHMT1Q9H9B1 1298 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 FBRSQ9HAH7 460 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 NCOA5Q9HCD5 579 aaKnown RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 INTS7Q9NVH2 962 aaKnown RBP4.34□□□□□ -1.71
PRPF4-203ENST00000488937 TAGLN3Q9UI15 199 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 PRR36Q9H6K5 1346 aa4.34□□□□□ -1.71
PRPF4-203ENST00000488937 A0A1W2PQH9 124 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 PLD2O14939 933 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 PRPF3O43395 683 aaKnown RBP4.33□□□□□ -1.72
PRPF4-203ENST00000488937 ABLIM3O94929 683 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 F2P00734 622 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 TRIM27P14373 513 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 HTR3AP46098 478 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 GRAMD1BQ3KR37 738 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 TIGD5Q53EQ6 642 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 UBXN11Q5T124 520 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 LRCH2Q5VUJ6 765 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 WWC2Q6AWC2 1192 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 CRIP3Q6Q6R5 217 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 C6orf15Q6UXA7 325 aaPredicted RBP4.33□□□□□ -1.72
PRPF4-203ENST00000488937 REC114Q7Z4M0 266 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 STRA8Q7Z7C7 330 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 TSPYL5Q86VY4 417 aaPredicted RBP4.33□□□□□ -1.72
PRPF4-203ENST00000488937 LINC01356Q8N9X3 169 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 ATL2Q8NHH9 583 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 CHMP4CQ96CF2 233 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 TARS2Q9BW92 718 aaKnown RBP4.33□□□□□ -1.72
PRPF4-203ENST00000488937 DUSP15Q9H1R2 295 aaPredicted RBP4.33□□□□□ -1.72
PRPF4-203ENST00000488937 EPB41L4AQ9HCS5 686 aaPredicted RBP4.33□□□□□ -1.72
PRPF4-203ENST00000488937 NRBP1Q9UHY1 535 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 ADAM30Q9UKF2 790 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 INTUQ9ULD6 942 aa4.33□□□□□ -1.72
PRPF4-203ENST00000488937 GOLGA6CA6NDK9 693 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 GOLGA6BA6NDN3 693 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 DDAH1O94760 285 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 ATE1O95260 518 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 FAM163BP0C2L3 166 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 GOLGA6DP0CG33 693 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 GRK4P32298 578 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 CLCQ05315 142 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 MLC1Q15049 377 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 NKG7Q16617 165 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 CWF19L2Q2TBE0 894 aaKnown RBP4.32□□□□□ -1.72
PRPF4-203ENST00000488937 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 TMEM201Q5SNT2 666 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 ADGRF1Q5T601 910 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 KSR2Q6VAB6 950 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 EEPD1Q7L9B9 569 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 CDH24Q86UP0 819 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 MRPL41Q8IXM3 137 aaKnown RBP4.32□□□□□ -1.72
PRPF4-203ENST00000488937 JARID2Q92833 1246 aaPredicted RBP4.32□□□□□ -1.72
PRPF4-203ENST00000488937 HOOK2Q96ED9 719 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 CLUHP3Q96NS8 147 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 BRMS1Q9HCU9 246 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 PTPRHQ9HD43 1115 aa4.32□□□□□ -1.72
PRPF4-203ENST00000488937 GOLGA6AQ9NYA3 693 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms