RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
ARHGEF39-204ENST00000488918 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 TGFB3P10600 412 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 SNX17Q15036 470 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 DGKDQ16760 1214 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 USP17L6PQ6QN14 398 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 CDHR1Q96JP9 859 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 KATNAL1Q9BW62 490 aa12.86□□□□□ -0.35
ARHGEF39-204ENST00000488918 PIK3CDO00329 1044 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 CDKL5O76039 1030 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 FOSP01100 380 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 BMP8BP34820 402 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 ZNF76P36508 570 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 NKX3-2P78367 333 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 GHRHRQ02643 423 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 NEDD9Q14511 834 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 CCSAPQ6IQ19 270 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 ANKRD33Q7Z3H0 272 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 TDHQ8IZJ6 230 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 TMEM199Q8N511 208 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 SPATA33Q96N06 139 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
ARHGEF39-204ENST00000488918 SMCO2A6NFE2 343 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 A6NJR5 290 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 OPLAHO14841 1288 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 GNA11P29992 359 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 ANAPC15P60006 121 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 PSMC6P62333 389 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 CCT2P78371 535 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 IRX5P78411 483 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 FPGSQ05932 587 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 SLC35G1Q2M3R5 365 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 MCTP2Q6DN12 878 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 BICD2Q8TD16 824 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 COPS5Q92905 334 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 BADQ92934 168 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 GDF15Q99988 308 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 TCEAL9Q9UHQ7 104 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 CNTNAP5Q8WYK1 1306 aa12.84□□□□□ -0.35
ARHGEF39-204ENST00000488918 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.35
ARHGEF39-204ENST00000488918 FIBPO43427 364 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 SORBS3O60504 671 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 GGPS1O95749 300 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 SCG2P13521 617 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 XBP1P17861 261 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 PURAQ00577 322 aaKnown RBP12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 STK3Q13188 491 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 FBXL16Q8N461 479 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 CCDC155Q8N6L0 562 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 C7orf31Q8N865 590 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 RETREG2Q8NC44 543 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 PPTC7Q8NI37 304 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 SLKQ9H2G2 1235 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 MTIF3Q9H2K0 278 aaKnown RBP12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 RIC8AQ9NPQ8 531 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 BARHL2Q9NY43 387 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 PCDHA6Q9UN73 950 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 PCDHA8Q9Y5H6 950 aa12.83□□□□□ -0.36
ARHGEF39-204ENST00000488918 MYH6P13533 1939 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 BRCA2P51587 3418 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 MEIS2O14770 477 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 KIAA0355O15063 1070 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 TIMP1P01033 207 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 MMP3P08254 477 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 CDC27P30260 824 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 FAAP100Q0VG06 881 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.366e-7■■■■■ 27
ARHGEF39-204ENST00000488918 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 UBE2SQ16763 222 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 PFKFB3Q16875 520 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 CELF3Q5SZQ8 465 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 CCDC62Q6P9F0 684 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 HIPK3Q9H422 1215 aa12.82□□□□□ -0.36
ARHGEF39-204ENST00000488918 ZNF215Q9UL58 517 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms