RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 DIS3Q9Y2L1 958 aaKnown RBP14.01□□□□□ -0.17
TRAIP-209ENST00000488860 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
TRAIP-209ENST00000488860 HOXC6P09630 235 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 MCM7P33993 719 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 CEBPZQ03701 1054 aaKnown RBP14□□□□□ -0.17
TRAIP-209ENST00000488860 ZNF174Q15697 407 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 STXBP2Q15833 593 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 OTOP1Q7RTM1 612 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 FBXO16Q8IX29 292 aaPredicted RBP14□□□□□ -0.17
TRAIP-209ENST00000488860 NAP1L4Q99733 375 aaKnown RBP14□□□□□ -0.17
TRAIP-209ENST00000488860 FTOQ9C0B1 505 aaKnown RBP eCLIP14□□□□□ -0.17
TRAIP-209ENST00000488860 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
TRAIP-209ENST00000488860 PCDHB6Q9Y5E3 794 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 ATP6V1DQ9Y5K8 247 aa14□□□□□ -0.17
TRAIP-209ENST00000488860 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 SLC37A4O43826 429 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 NEMFO60524 1076 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 CYP3A4P08684 503 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 ELNP15502 786 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 GCFC2P16383 781 aaKnown RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 EDNRBP24530 442 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 TRAPPC10P48553 1259 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 TOB1P50616 345 aaPredicted RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 USP11P51784 963 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 DNM1Q05193 864 aaKnown RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 PRR16Q569H4 304 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 SEPT14Q6ZU15 432 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 TRIB2Q92519 343 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 CHAMP1Q96JM3 812 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 ZHX1Q9UKY1 873 aaPredicted RBP13.99□□□□□ -0.17
TRAIP-209ENST00000488860 WDR81Q562E7 1941 aa13.99□□□□□ -0.17
TRAIP-209ENST00000488860 LOC102724159A0A0B4J2E5 919 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 CYP2C19P33261 490 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 PRMT2P55345 433 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 SETQ01105 290 aaPredicted RBP13.98□□□□□ -0.17
TRAIP-209ENST00000488860 IRF5Q13568 498 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 MTMR1Q13613 665 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 PWP2Q15269 919 aaKnown RBP13.98□□□□□ -0.17
TRAIP-209ENST00000488860 GNPTABQ3T906 1256 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 CEP55Q53EZ4 464 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 OLFML2BQ68BL8 750 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 XRRA1Q6P2D8 792 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 NLRX1Q86UT6 975 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 VSIG10LQ86VR7 867 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 CYP2W1Q8TAV3 490 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
TRAIP-209ENST00000488860 USP28Q96RU2 1077 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 MXRA8Q9BRK3 442 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 WDR11Q9BZH6 1224 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 PKD2L1Q9P0L9 805 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 UBIAD1Q9Y5Z9 338 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 CLIC4Q9Y696 253 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 PTCH2Q9Y6C5 1203 aa13.98□□□□□ -0.17
TRAIP-209ENST00000488860 EDIL3O43854 480 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 ADCY3O60266 1144 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 MARCH6O60337 910 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 EIF3JO75822 258 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 STAM2O75886 525 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 XRCC5P13010 732 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 ITGB5P18084 799 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 CIITAP33076 1130 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 KRT85P78386 507 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 MFSD14CQ5VZR4 134 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 ANO1Q5XXA6 986 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 PPP4R3AQ6IN85 833 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 MOXD1Q6UVY6 613 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 MORC4Q8TE76 937 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 VTA1Q9NP79 307 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 TFIP11Q9UBB9 837 aaKnown RBP13.97□□□□□ -0.17
TRAIP-209ENST00000488860 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
TRAIP-209ENST00000488860 IGLV3-22A0A075B6J6 115 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 FIBPO43427 364 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 SORBS3O60504 671 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 SNAI1O95863 264 aaPredicted RBP13.96□□□□□ -0.17
TRAIP-209ENST00000488860 ARP10275 920 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 STK38Q15208 465 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 CALCRLQ16602 461 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 Q4G0T1 1027 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 PRAMEF19Q5SWL8 479 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
TRAIP-209ENST00000488860 SLAIN1Q8ND83 568 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 GPRASP2Q96D09 838 aa13.96□□□□□ -0.17
TRAIP-209ENST00000488860 INPP4AQ96PE3 977 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms