RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 HAS1Q92839 578 aa12.13□□□□□ -0.47
USP11-209ENST00000488848 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
USP11-209ENST00000488848 INPP4AQ96PE3 977 aaPredicted RBP12.13□□□□□ -0.47
USP11-209ENST00000488848 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
USP11-209ENST00000488848 TMEM60Q9H2L4 133 aa12.13□□□□□ -0.47
USP11-209ENST00000488848 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
USP11-209ENST00000488848 UBIAD1Q9Y5Z9 338 aa12.13□□□□□ -0.47
USP11-209ENST00000488848 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
USP11-209ENST00000488848 TLR2O60603 784 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 CEBPZQ03701 1054 aaKnown RBP12.12□□□□□ -0.47
USP11-209ENST00000488848 SPIRE1Q08AE8 756 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 PGM5Q15124 567 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 IL17AQ16552 155 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 Q3C1V9 767 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
USP11-209ENST00000488848 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 GPRASP2Q96D09 838 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 RMDN3Q96TC7 470 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 CCSER1Q9C0I3 900 aa12.12□□□□□ -0.47
USP11-209ENST00000488848 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
USP11-209ENST00000488848 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
USP11-209ENST00000488848 ASTN1O14525 1302 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 PLXNA1Q9UIW2 1896 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 GOLGA6L4A6NEF3 574 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 CA12O43570 354 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
USP11-209ENST00000488848 MAPK4P31152 587 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 ICAM3P32942 547 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 MAP2K2P36507 400 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
USP11-209ENST00000488848 GRB14Q14449 540 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 CALCRLQ16602 461 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 HYIQ5T013 277 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 SLC5A5Q92911 643 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 FGD4Q96M96 766 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 RIT2Q99578 217 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 GOLPH3LQ9H4A5 285 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 JADE2Q9NQC1 790 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
USP11-209ENST00000488848 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 ABT1Q9ULW3 272 aaKnown RBP12.11□□□□□ -0.47
USP11-209ENST00000488848 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
USP11-209ENST00000488848 MSH4O15457 936 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 IGHA2P01877 340 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 HOXC6P09630 235 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 PFKFB1P16118 471 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 ITGB5P18084 799 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 MUTP22033 750 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 GRIN1Q05586 938 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 FCHSD1Q86WN1 690 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
USP11-209ENST00000488848 ANKRD35Q8N283 1001 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
USP11-209ENST00000488848 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
USP11-209ENST00000488848 CDHR1Q96JP9 859 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 TAAR1Q96RJ0 339 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 PAGR1Q9BTK6 254 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 CSRNP2Q9H175 543 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 PORCNQ9H237 461 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 VAV3Q9UKW4 847 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 CASP8AP2Q9UKL3 1982 aa12.1□□□□□ -0.47
USP11-209ENST00000488848 B4DLN1 442 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 PSMD10O75832 226 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 NR3C2P08235 984 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 FCER1AP12319 257 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 LIG1P18858 919 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 ATP2B1P20020 1258 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 CCND2P30279 289 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 ALDH5A1P51649 535 aaPredicted RBP12.09□□□□□ -0.47
USP11-209ENST00000488848 PPP2R5CQ13362 524 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 PLS1Q14651 629 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 KCTD2Q14681 263 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 TAF1CQ15572 869 aaPredicted RBP12.09□□□□□ -0.47
USP11-209ENST00000488848 E2F4Q16254 413 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 SAMD1Q6SPF0 538 aaPredicted RBP12.09□□□□□ -0.47
USP11-209ENST00000488848 MAMDC4Q6UXC1 1216 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 NCAPG2Q86XI2 1143 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 USP6NLQ92738 828 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 CAPNS2Q96L46 248 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 MAGEF1Q9HAY2 307 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 ZFYVE28Q9HCC9 887 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 KCNH3Q9ULD8 1083 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
USP11-209ENST00000488848 NFASCO94856 1347 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms