RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 SMCR8Q8TEV9 937 aaPredicted RBP8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 ABHD8Q96I13 439 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 MAF1Q9H063 256 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 SPATC1LQ9H0A9 340 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 ACAD9Q9H845 621 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 PRDM10Q9NQV6 1147 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 BTBD7Q9P203 1132 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 RBPJLQ9UBG7 517 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 PCDHA7Q9UN72 937 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 RIPK3Q9Y572 518 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 SMCHD1A6NHR9 2005 aa8.59□□□□□ -1.03
APOBEC3A-203ENST00000488758 RLFQ13129 1914 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 LAD1O00515 517 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 CUTAO60888 179 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 SLC10A3P09131 477 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 CYP2C8P10632 490 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 GCFC2P16383 781 aaKnown RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 SREBF1P36956 1147 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 GCLCP48506 637 aaPredicted RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 CTCFP49711 727 aaPredicted RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 VEGFBP49765 207 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 HSD17B4P51659 736 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 RPS6P62753 249 aaKnown RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 CCNA1P78396 465 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 SREBF2Q12772 1141 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 GRM1Q13255 1194 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 BAATQ14032 418 aaPredicted RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 ARL6IP4Q66PJ3 421 aaKnown RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 PPP4R3AQ6IN85 833 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 RIOX2Q8IUF8 465 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 CCAR1Q8IX12 1150 aaKnown RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 ANKRD35Q8N283 1001 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 FAM43AQ8N2R8 423 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 GPRC5AQ8NFJ5 357 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 SYTL5Q8TDW5 730 aaPredicted RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 FERMT2Q96AC1 680 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 PARK7Q99497 189 aaKnown RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 PTPN18Q99952 460 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 PLSCR2Q9NRY7 297 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 SRPRBQ9Y5M8 271 aaKnown RBP8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 PARP14Q460N5 1801 aa8.58□□□□□ -1.04
APOBEC3A-203ENST00000488758 A0A1W2PQ27 194 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 A0A1W2PQ64 194 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 A0A1W2PQD8 194 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 WNT7AO00755 349 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 NEMFO60524 1076 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 CNMDO75829 334 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 TDP2O95551 362 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 CYP3A4P08684 503 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 OR52Z1P0C646 297 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 PTPREP23469 700 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 ATP2C1P98194 919 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 GHRHRQ02643 423 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 CALCRLQ16602 461 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 DEFB115Q30KQ5 88 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 Q3C1V9 767 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 WDR78Q5VTH9 848 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 ARHGEF16Q5VV41 709 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 MOXD1Q6UVY6 613 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 DTHD1Q6ZMT9 781 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 CCDC73Q6ZRK6 1079 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 ANKRD13CQ8N6S4 541 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 TAAR1Q96RJ0 339 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 RMDN3Q96TC7 470 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 ANP32EQ9BTT0 268 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 MOV10L1Q9BXT6 1211 aaKnown RBP8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 MROH8Q9H579 483 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 TXNRD2Q9NNW7 524 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 ZCCHC17Q9NP64 241 aaKnown RBP8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 FAM13BQ9NYF5 915 aa8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 DDX25Q9UHL0 483 aaKnown RBP8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 MORC2Q9Y6X9 1032 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3A-203ENST00000488758 PFASO15067 1338 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CYP3A7-CYP3A51PA0A087WV96 503 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 VWA3AA6NCI4 1184 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 FAM155AB1AL88 458 aaPredicted RBP8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 PEX10O60683 326 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 HSPA8P11142 646 aaKnown RBP8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 ERCC3P19447 782 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CMA1P23946 247 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CYP3A7P24462 503 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CIITAP33076 1130 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 PRPHP41219 470 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 ERVK-9P63128 1117 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 ERVK-24P63145 666 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 UBXN2AP68543 259 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CAMK2BQ13554 666 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 TAF1CQ15572 869 aaPredicted RBP8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 PRR16Q569H4 304 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 AXDND1Q5T1B0 1012 aaPredicted RBP8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 CYP4F22Q6NT55 531 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 POTEEQ6S8J3 1075 aa8.56□□□□□ -1.04
APOBEC3A-203ENST00000488758 SLC30A10Q6XR72 485 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms