RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ARHGAP1Q07960 439 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 SHHQ15465 462 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 CCDC82Q8N4S0 544 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 MTG1Q9BT17 334 aaPredicted RBP20.49■□□□□ 0.87
ITGB1-215ENST00000488494 PPP1R12CQ9BZL4 782 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 TRPV6Q9H1D0 765 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 PPP4R2Q9NY27 417 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 BRPF3Q9ULD4 1205 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 FRMPD4Q14CM0 1322 aa20.49■□□□□ 0.87
ITGB1-215ENST00000488494 B4GALT4O60513 344 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 HMGB1P09429 215 aaKnown RBP20.48■□□□□ 0.87
ITGB1-215ENST00000488494 CPA1P15085 419 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 CCND2P30279 289 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 KCNB2Q92953 911 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 JAKMIP1Q96N16 626 aaKnown RBP20.48■□□□□ 0.87
ITGB1-215ENST00000488494 SEZ6LQ9BYH1 1024 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 SNX14Q9Y5W7 946 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 CNTNAP5Q8WYK1 1306 aa20.48■□□□□ 0.87
ITGB1-215ENST00000488494 KLF18A0A0U1RQI7 1052 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 ZBTB43O43298 467 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 RGS20O76081 388 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 MMP3P08254 477 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 RTN1Q16799 776 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 VSIG10LQ86VR7 867 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 PPP1R13LQ8WUF5 828 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 CUL5Q93034 780 aa20.47■□□□□ 0.87
ITGB1-215ENST00000488494 ALDH8A1Q9H2A2 487 aaPredicted RBP20.47■□□□□ 0.87
ITGB1-215ENST00000488494 DDX41Q9UJV9 622 aaKnown RBP20.47■□□□□ 0.87
ITGB1-215ENST00000488494 SCN10AQ9Y5Y9 1956 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 GOLGA8AA7E2F4 631 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 GOLGA8BA8MQT2 603 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 KPNA6O60684 536 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 FGD1P98174 961 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 FAM47CQ5HY64 1035 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 MFSD5Q6N075 450 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 USP17L6PQ6QN14 398 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 HEATR3Q7Z4Q2 680 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 SMARCC2Q8TAQ2 1214 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 GPKOWQ92917 476 aaPredicted RBP eCLIP20.46■□□□□ 0.872e-6■■■■□ 21.7
ITGB1-215ENST00000488494 ZFP91Q96JP5 570 aaPredicted RBP20.46■□□□□ 0.87
ITGB1-215ENST00000488494 HIPK3Q9H422 1215 aa20.46■□□□□ 0.87
ITGB1-215ENST00000488494 TRMT13Q9NUP7 481 aaKnown RBP20.46■□□□□ 0.87
ITGB1-215ENST00000488494 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
ITGB1-215ENST00000488494 NAP1L2Q9ULW6 460 aaPredicted RBP20.46■□□□□ 0.87
ITGB1-215ENST00000488494 SORBS3O60504 671 aa20.45■□□□□ 0.86
ITGB1-215ENST00000488494 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
ITGB1-215ENST00000488494 CYP2C18P33260 490 aa20.45■□□□□ 0.86
ITGB1-215ENST00000488494 CHMP4BP1P59074 171 aa20.45■□□□□ 0.86
ITGB1-215ENST00000488494 NBPF20Q3BBV1 942 aa20.45■□□□□ 0.86
ITGB1-215ENST00000488494 EMID1Q96A84 441 aaPredicted RBP20.45■□□□□ 0.86
ITGB1-215ENST00000488494 RNPC3Q96LT9 517 aaKnown RBP20.45■□□□□ 0.86
ITGB1-215ENST00000488494 UMODL1Q5DID0 1318 aa20.45■□□□□ 0.86
ITGB1-215ENST00000488494 PIK3CDO00329 1044 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 MEIS2O14770 477 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 CSF2RAP15509 400 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 UBA1P22314 1058 aaKnown RBP20.44■□□□□ 0.86
ITGB1-215ENST00000488494 PPIGQ13427 754 aaKnown RBP eCLIP20.44■□□□□ 0.86
ITGB1-215ENST00000488494 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 GPR153Q6NV75 609 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 DHX37Q8IY37 1157 aaKnown RBP20.44■□□□□ 0.86
ITGB1-215ENST00000488494 TMEM199Q8N511 208 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 PPTC7Q8NI37 304 aa20.44■□□□□ 0.86
ITGB1-215ENST00000488494 NOC4LQ9BVI4 516 aaKnown RBP20.44■□□□□ 0.86
ITGB1-215ENST00000488494 GGPS1O95749 300 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 ZNF286BP0CG31 522 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 MRPS9P82933 396 aaKnown RBP20.43■□□□□ 0.86
ITGB1-215ENST00000488494 LAMC2Q13753 1193 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 UBE2SQ16763 222 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 WWC2Q6AWC2 1192 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 KCNV1Q6PIU1 500 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 Q6ZUG5 572 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 Q7L0L9 218 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 BRF1Q92994 677 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 PSTPIP2Q9H939 334 aa20.43■□□□□ 0.86
ITGB1-215ENST00000488494 CYP2C9P11712 490 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
ITGB1-215ENST00000488494 RPS6KB1P23443 525 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 APOBRQ0VD83 1088 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 FUT2Q10981 343 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 DGKDQ16760 1214 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 GNPTABQ3T906 1256 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 NFRKBQ6P4R8 1299 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 DEFB123Q8N688 67 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 INPP4AQ96PE3 977 aaPredicted RBP20.42■□□□□ 0.86
ITGB1-215ENST00000488494 WNT8AQ9H1J5 351 aa20.42■□□□□ 0.86
ITGB1-215ENST00000488494 STAM2O75886 525 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 SUPT20HL2P0C7V6 817 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 CDC27P30260 824 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 METAP2P50579 478 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGB1-215ENST00000488494 RCAN1P53805 252 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 SP2Q02086 613 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 CELF3Q5SZQ8 465 aaKnown RBP20.41■□□□□ 0.86
ITGB1-215ENST00000488494 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 KAT2BQ92831 832 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 SPATA33Q96N06 139 aa20.41■□□□□ 0.86
ITGB1-215ENST00000488494 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.41■□□□□ 0.86
ITGB1-215ENST00000488494 F2P00734 622 aa20.4■□□□□ 0.86
ITGB1-215ENST00000488494 ACRP10323 421 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms