RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 RPN1P04843 607 aaKnown RBP22.72■■□□□ 1.23
NECAB3-213ENST00000488489 MAP3K9P80192 1104 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 USP50Q70EL3 339 aaPredicted RBP22.72■■□□□ 1.23
NECAB3-213ENST00000488489 SNX29Q8TEQ0 813 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 IGLV3-22A0A075B6J6 115 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 ALAS1P13196 640 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 HSD17B4P51659 736 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 MUM1L1Q5H9M0 696 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 KRT79Q5XKE5 535 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 CNKSR2Q8WXI2 1034 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 HOMER2Q9NSB8 354 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 COL20A1Q9P218 1284 aa22.72■■□□□ 1.23
NECAB3-213ENST00000488489 GLTPD2A6NH11 291 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 MSH4O15457 936 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 ATP1A3P13637 1013 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 SPIRE1Q08AE8 756 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 TRMT44Q8IYL2 757 aaKnown RBP22.71■■□□□ 1.23
NECAB3-213ENST00000488489 SLFN12Q8IYM2 578 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 FANCLQ9NW38 375 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 DACH1Q9UI36 760 aa22.71■■□□□ 1.23
NECAB3-213ENST00000488489 PAPPA2Q9BXP8 1791 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 PPP1R3GB7ZBB8 358 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 TBX3O15119 743 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 KLRC4O43908 158 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 STAT3P40763 770 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 KCNK18Q7Z418 384 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 MAGEF1Q9HAY2 307 aa22.7■■□□□ 1.23
NECAB3-213ENST00000488489 OTOFQ9HC10 1997 aa22.7■■□□□ 1.22
NECAB3-213ENST00000488489 PPP1R12BO60237 982 aaPredicted RBP22.7■■□□□ 1.22
NECAB3-213ENST00000488489 ZNF76P36508 570 aa22.7■■□□□ 1.22
NECAB3-213ENST00000488489 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
NECAB3-213ENST00000488489 ZBED4O75132 1171 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 MYL1P05976 194 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 GTF2F1P35269 517 aaKnown RBP eCLIP22.69■■□□□ 1.228e-7■■■■□ 24.7
NECAB3-213ENST00000488489 TMEM119Q4V9L6 283 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 ZC3H15Q8WU90 426 aaKnown RBP22.69■■□□□ 1.22
NECAB3-213ENST00000488489 MRFAP1L1Q96HT8 127 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 TRIM9Q9C026 710 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 GOLGA6L6A8MZA4 724 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 POTECB2RU33 542 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 ERCC5P28715 1186 aaPredicted RBP22.69■■□□□ 1.22
NECAB3-213ENST00000488489 GHRHRQ02643 423 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 DHX8Q14562 1220 aaKnown RBP22.69■■□□□ 1.22
NECAB3-213ENST00000488489 CATSPERGQ6ZRH7 1159 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 MOB2Q70IA6 237 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 C17orf53Q8N3J3 647 aaPredicted RBP22.69■■□□□ 1.22
NECAB3-213ENST00000488489 REPS2Q8NFH8 660 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 ENOX1Q8TC92 643 aaKnown RBP22.69■■□□□ 1.22
NECAB3-213ENST00000488489 CDCA5Q96FF9 252 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 KCNF1Q9H3M0 494 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 ADAMTS5Q9UNA0 930 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 RIPK3Q9Y572 518 aa22.69■■□□□ 1.22
NECAB3-213ENST00000488489 COL11A1P12107 1806 aaPredicted RBP22.68■■□□□ 1.22
NECAB3-213ENST00000488489 DSG3P32926 999 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 MCM6Q14566 821 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 KMT5BQ4FZB7 885 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 KLHL10Q6JEL2 608 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 KIAA1524Q8TCG1 905 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 CDK5RAP3Q96JB5 506 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 FAM20AQ96MK3 541 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 C7orf25Q9BPX7 421 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 TMOD4Q9NZQ9 345 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 STK17AQ9UEE5 414 aa22.68■■□□□ 1.22
NECAB3-213ENST00000488489 TPM4P67936 248 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 COG2Q14746 738 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 SH3D19Q5HYK7 790 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 ZNF658Q5TYW1 1059 aaPredicted RBP22.67■■□□□ 1.22
NECAB3-213ENST00000488489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.67■■□□□ 1.22
NECAB3-213ENST00000488489 LARP4BQ92615 738 aaKnown RBP22.67■■□□□ 1.22
NECAB3-213ENST00000488489 RMND1Q9NWS8 449 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 NRBP1Q9UHY1 535 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 GDAQ9Y2T3 454 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 NFE2L3Q9Y4A8 694 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 WDR90Q96KV7 1748 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 FDX1P10109 184 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 HYIQ5T013 277 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 SLC30A10Q6XR72 485 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 MCF2L2Q86YR7 1114 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 RAD54LQ92698 747 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 TAF1DQ9H5J8 278 aaPredicted RBP22.67■■□□□ 1.22
NECAB3-213ENST00000488489 CTDP1Q9Y5B0 961 aaPredicted RBP22.67■■□□□ 1.22
NECAB3-213ENST00000488489 CSADQ9Y600 493 aa22.67■■□□□ 1.22
NECAB3-213ENST00000488489 PTPRFP10586 1907 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 CDC25BP30305 580 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 CCT6AP40227 531 aaKnown RBP22.66■■□□□ 1.22
NECAB3-213ENST00000488489 KCNB1Q14721 858 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 CEP55Q53EZ4 464 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 HSP90AA4PQ58FG1 418 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 CT47A1Q5JQC4 288 aaPredicted RBP22.66■■□□□ 1.22
NECAB3-213ENST00000488489 SV2BQ7L1I2 683 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 CLMNQ96JQ2 1002 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 TRERF1Q96PN7 1200 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 IFNKQ9P0W0 207 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 VAV3Q9UKW4 847 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 ZNF214Q9UL59 606 aaPredicted RBP22.66■■□□□ 1.22
NECAB3-213ENST00000488489 STX17P56962 302 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 RPS6P62753 249 aaKnown RBP22.66■■□□□ 1.22
NECAB3-213ENST00000488489 FANCCQ00597 558 aa22.66■■□□□ 1.22
NECAB3-213ENST00000488489 EAPPQ56P03 285 aaPredicted RBP22.66■■□□□ 1.22
NECAB3-213ENST00000488489 DRC7Q8IY82 874 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms