RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 POLR2DO15514 142 aaKnown RBP14.38□□□□□ -0.11
NELFE-209ENST00000488426 TXLNAP40222 546 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 FCGRTP55899 365 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 IL17AQ16552 155 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 RNF214Q8ND24 703 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 AK8Q96MA6 479 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 SLF1Q9BQI6 1058 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 FBXO28Q9NVF7 368 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 GNRH1P01148 92 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 FDX1P10109 184 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 ELNP15502 786 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 VCAM1P19320 739 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP11P51784 963 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 HERVK_113P62684 666 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 FAM110CQ1W6H9 321 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 USP17L6PQ6QN14 398 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 FAM200AQ8TCP9 573 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 RAET1EQ8TD07 263 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 EPSTI1Q96J88 318 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 ANO3Q9BYT9 981 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 PANK2Q9BZ23 570 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
NELFE-209ENST00000488426 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
NELFE-209ENST00000488426 TNPO2O14787 897 aaKnown RBP14.37□□□□□ -0.11
NELFE-209ENST00000488426 OPLAHO14841 1288 aa14.37□□□□□ -0.11
NELFE-209ENST00000488426 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
NELFE-209ENST00000488426 GRK4P32298 578 aa14.37□□□□□ -0.11
NELFE-209ENST00000488426 ZRSR1Q15695 479 aaKnown RBP14.37□□□□□ -0.11
NELFE-209ENST00000488426 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
NELFE-209ENST00000488426 MOXD1Q6UVY6 613 aa14.37□□□□□ -0.11
NELFE-209ENST00000488426 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 EDIL3O43854 480 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 ICAM1P05362 532 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 HOXD10P28358 340 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
NELFE-209ENST00000488426 CCDC174Q6PII3 467 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 MTMR9Q96QG7 549 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 TANGO6Q9C0B7 1094 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
NELFE-209ENST00000488426 SERTAD1Q9UHV2 236 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 TUBE1Q9UJT0 475 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 PPP1R9AQ9ULJ8 1098 aa14.36□□□□□ -0.11
NELFE-209ENST00000488426 RBBP6Q7Z6E9 1792 aaKnown RBP14.36□□□□□ -0.11
NELFE-209ENST00000488426 CNMDO75829 334 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 TDP2O95551 362 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 GCLCP48506 637 aaPredicted RBP14.35□□□□□ -0.11
NELFE-209ENST00000488426 PRMT2P55345 433 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 MDM2Q00987 491 aaPredicted RBP14.35□□□□□ -0.11
NELFE-209ENST00000488426 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.112e-10■■■■□ 19.3
NELFE-209ENST00000488426 CALCRLQ16602 461 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 POTEDQ86YR6 584 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 CEP57L1Q8IYX8 460 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 PDILTQ8N807 584 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 PORCNQ9H237 461 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 MORF4L1Q9UBU8 362 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 CYP3A7-CYP3A51PA0A087WV96 503 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 A0A087X0B3 334 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 FLOT1O75955 427 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 CYP3A7P24462 503 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 SREBF1P36956 1147 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 POSTNQ15063 836 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 CATSPERGQ6ZRH7 1159 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 IQUBQ8NA54 791 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 CRYGNQ8WXF5 182 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 DHX58Q96C10 678 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 MBOAT7Q96N66 472 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 PAGR1Q9BTK6 254 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 SLC38A10Q9HBR0 1119 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 DDX25Q9UHL0 483 aaKnown RBP14.35□□□□□ -0.11
NELFE-209ENST00000488426 SMCHD1A6NHR9 2005 aa14.35□□□□□ -0.11
NELFE-209ENST00000488426 SLC37A4O43826 429 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 ADCY3O60266 1144 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 ZNF165P49910 485 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■□ 25.2
NELFE-209ENST00000488426 TRIM32Q13049 653 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 TMEM266Q2M3C6 531 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 RAB34Q9BZG1 259 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 NAT10Q9H0A0 1025 aaKnown RBP14.34□□□□□ -0.11
NELFE-209ENST00000488426 DNAJC25Q9H1X3 360 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 CCPG1Q9ULG6 757 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 ZNF536O15090 1300 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 RLFQ13129 1914 aa14.34□□□□□ -0.11
NELFE-209ENST00000488426 GCOM1H8Y6P7 765 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms