RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 DAGLBQ8NCG7 672 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 TRPV1Q8NER1 839 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 USP28Q96RU2 1077 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 PIGSQ96S52 555 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 C6orf50Q9HD87 102 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 RCOR1Q9UKL0 485 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 PCDHA4Q9UN74 947 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 MYH15Q9Y2K3 1946 aa13.77□□□□□ -0.21
HLA-DOB-209ENST00000488325 A0A1W2PRG0 241 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 ESYT2A0FGR8 921 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 GRXCR1A8MXD5 290 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 MYCNP04198 464 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 CLTBP09497 229 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 CYP2C19P33261 490 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 ADCYAP1R1P41586 468 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 TRAF1Q13077 416 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 SYDE2Q5VT97 1194 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 C1orf53Q5VUE5 145 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 ANO1Q5XXA6 986 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 BTNL9Q6UXG8 535 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 FAM160B2Q86V87 743 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 KCNG4Q8TDN1 519 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 SYAP1Q96A49 352 aaPredicted RBP13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 FERMT2Q96AC1 680 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 MTMR8Q96EF0 704 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 CPVLQ9H3G5 476 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 CEP131Q9UPN4 1083 aa13.76□□□□□ -0.21
HLA-DOB-209ENST00000488325 TCHHQ07283 1943 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 ZBTB5O15062 677 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 KIAA0355O15063 1070 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 PLA2G6O60733 806 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 BMP15O95972 392 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 HOXA7P31268 230 aaPredicted RBP13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 USP14P54578 494 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 WDR18Q9BV38 432 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 KIAA1683Q9H0B3 1180 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 GLT8D2Q9H1C3 349 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 PLXNA1Q9UIW2 1896 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 ATAD5Q96QE3 1844 aa13.75□□□□□ -0.21
HLA-DOB-209ENST00000488325 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 CYBAP13498 195 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 SLC16A2P36021 539 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 STAT2P52630 851 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 CEBPZQ03701 1054 aaKnown RBP13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 NR5A1Q13285 461 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 MTMR2Q13614 643 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 MICALL1Q8N3F8 863 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 LINC00301Q8NCQ3 95 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 TMOD4Q9NZQ9 345 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
HLA-DOB-209ENST00000488325 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 SMCO2A6NFE2 343 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 SPTLC2O15270 562 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 NPY5RQ15761 445 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 CDC37Q16543 378 aaPredicted RBP13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 FAM83BQ5T0W9 1011 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 TNFRSF25Q93038 417 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 BAZ2BQ9UIF8 2168 aaKnown RBP13.73□□□□□ -0.21
HLA-DOB-209ENST00000488325 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 C19orf81C9J6K1 198 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 PPP6R2O75170 966 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 HOXC6P09630 235 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 ME1P48163 572 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 ADCY7P51828 1080 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 SLC39A14Q15043 492 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 LRRC41Q15345 812 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 WDR78Q5VTH9 848 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 NPLOC4Q8TAT6 608 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
HLA-DOB-209ENST00000488325 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms