RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SLC26A4O43511 780 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 ADCY5O95622 1261 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 CUL4BQ13620 913 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 NCAPHQ15003 741 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 TMEM119Q4V9L6 283 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 HYIQ5T013 277 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 TREML2Q5T2D2 321 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 PRRT2Q7Z6L0 340 aaPredicted RBP10.63□□□□□ -0.71
SF3B1-211ENST00000487698 MLKLQ8NB16 471 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 CALML4Q96GE6 196 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 FAM20AQ96MK3 541 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 STK17AQ9UEE5 414 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 KCNH4Q9UQ05 1017 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 RABGAP1Q9Y3P9 1069 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 IRF6O14896 467 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 KRT79Q5XKE5 535 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 SARM1Q6SZW1 724 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
SF3B1-211ENST00000487698 SYTL5Q8TDW5 730 aaPredicted RBP10.62□□□□□ -0.71
SF3B1-211ENST00000487698 SNX29Q8TEQ0 813 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 TRERF1Q96PN7 1200 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 PLIN2Q99541 437 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 BLZF1Q9H2G9 400 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 HOMER2Q9NSB8 354 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 BLOC1S4Q9NUP1 217 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
SF3B1-211ENST00000487698 CTDP1Q9Y5B0 961 aaPredicted RBP10.62□□□□□ -0.71
SF3B1-211ENST00000487698 BECN2A8MW95 431 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 CXCL11O14625 94 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 HOXA7P31268 230 aaPredicted RBP10.61□□□□□ -0.71
SF3B1-211ENST00000487698 PPIL2Q13356 520 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 TMEM132BQ14DG7 1078 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 CEP55Q53EZ4 464 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 LDLRAD1Q5T700 205 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 SNRNP48Q6IEG0 339 aaKnown RBP10.61□□□□□ -0.71
SF3B1-211ENST00000487698 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 HSD3B7Q9H2F3 369 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 RNF146Q9NTX7 359 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 HOXC10Q9NYD6 342 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 VAV3Q9UKW4 847 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 KIAA1217Q5T5P2 1943 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 MEIS1O00470 390 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 KLRC4O43908 158 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 MARCH6O60337 910 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 ZNF76P36508 570 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 RPS6P62753 249 aaKnown RBP10.61□□□□□ -0.71
SF3B1-211ENST00000487698 UBXN2AP68543 259 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 CT47A1Q5JQC4 288 aaPredicted RBP10.61□□□□□ -0.71
SF3B1-211ENST00000487698 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 ARMC9Q7Z3E5 817 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 PLA2G4DQ86XP0 818 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 SLC5A5Q92911 643 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 TEX13BQ9BXU2 312 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 MAF1Q9H063 256 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 LOXHD1Q8IVV2 1947 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 KDM3AQ9Y4C1 1321 aa10.61□□□□□ -0.71
SF3B1-211ENST00000487698 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 RPN1P04843 607 aaKnown RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 STAT3P40763 770 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 MYL5Q02045 173 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 MOGSQ13724 837 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 TTLL12Q14166 644 aaPredicted RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 KCNB1Q14721 858 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 ECM1Q16610 540 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 PCNX4Q63HM2 1172 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 KCNK18Q7Z418 384 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 RAD54LQ92698 747 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 UIMC1Q96RL1 719 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 MED15Q96RN5 788 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 C7orf25Q9BPX7 421 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 TRIM9Q9C026 710 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 PSMD10O75832 226 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 BCRP11274 1271 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 CD44P16070 742 aaKnown RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 ERCC5P28715 1186 aaPredicted RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.712e-7■■□□□ 13.9
SF3B1-211ENST00000487698 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 CNNM4Q6P4Q7 775 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 LBX2Q6XYB7 198 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 RNF207Q6ZRF8 634 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 NIPA1Q7RTP0 329 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
SF3B1-211ENST00000487698 CDK5RAP3Q96JB5 506 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 MXRA8Q9BRK3 442 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 NT5C3AQ9H0P0 336 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 RMND1Q9NWS8 449 aa10.6□□□□□ -0.71
SF3B1-211ENST00000487698 WDR81Q562E7 1941 aa10.59□□□□□ -0.71
SF3B1-211ENST00000487698 PPP1R3GB7ZBB8 358 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms