RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 RASGRF2O14827 1237 aa16.71■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PRDM11Q9NQV5 511 aa16.71■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FBXL5Q9UKA1 691 aa16.71■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CCT8L1PA6NM43 557 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 OR52Z1P0C646 297 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SRGNP10124 158 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 INF2Q27J81 1249 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NUGGCQ68CJ6 796 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PROSER2Q86WR7 435 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NELFCDQ8IXH7 590 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CTTNBP2NLQ9P2B4 639 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DDAH1O94760 285 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 AGBL2Q5U5Z8 902 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PRLRP16471 622 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SCTRP47872 440 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 AENQ8WTP8 325 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CAVIN3Q969G5 261 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 MAP3K14Q99558 947 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
HLA-DQB1-209ENST00000487676 LAD1O00515 517 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CCND1P24385 295 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 AK8Q96MA6 479 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SPDYE3A6NKU9 549 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 LRRC53A6NM62 1247 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PDHBP11177 359 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TNNI2P48788 182 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SEMA3FQ13275 785 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ADAMTS1Q9UHI8 967 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TMOD1P28289 359 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 STAT1P42224 750 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ANTXR2P58335 489 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SYCP3Q8IZU3 236 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 A1BGP04217 495 aa16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TROVE2P10155 538 aaKnown RBP eCLIP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SLCO1A2P46721 670 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GRIN1Q05586 938 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GFPT1Q06210 699 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ANKRD20A3Q5VUR7 823 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 HS2ST1Q7LGA3 356 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DNAJC7Q99615 494 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 OSBPL1AQ9BXW6 950 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ECT2Q9H8V3 914 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 RIC8AQ9NPQ8 531 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 STXBP3O00186 592 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 IL9RQ01113 521 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 XPO6Q96QU8 1125 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CTNNA2P26232 953 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 PDCD2Q16342 344 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ARHGEF18Q6ZSZ5 1173 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KIF9Q9HAQ2 790 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 SMARCAL1Q9NZC9 954 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KRT15P19012 456 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 RCAN1P53805 252 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DYNC1I2Q13409 638 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 BYSLQ13895 437 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 GALNT17Q6IS24 598 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KCNV2Q8TDN2 545 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TBC1D22AQ8WUA7 517 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 MS4A14Q96JA4 679 aa16.68■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TBX22Q9Y458 520 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 WDR17Q8IZU2 1322 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 A0A0G2JLW4 131 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 BAG3O95817 575 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TECP42680 631 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 FUKQ8N0W3 1084 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 LACRTQ9GZZ8 138 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 DLC1Q96QB1 1528 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ATP5HO75947 161 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ABCB4P21439 1286 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 EZH2Q15910 746 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 CALCRLQ16602 461 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 KIRREL3Q8IZU9 778 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
HLA-DQB1-209ENST00000487676 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms