RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 PDE4DQ08499 809 aa19.29■□□□□ 0.68
TOM1-214ENST00000487670 RBL2Q08999 1139 aa19.29■□□□□ 0.68
TOM1-214ENST00000487670 LY6KQ17RY6 165 aa19.29■□□□□ 0.68
TOM1-214ENST00000487670 ZNF618Q5T7W0 954 aa19.29■□□□□ 0.68
TOM1-214ENST00000487670 HDAC6Q9UBN7 1215 aa19.29■□□□□ 0.68
TOM1-214ENST00000487670 ABHD14A-ACY1A0A1B0GW23 586 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 RNF113AO15541 343 aaKnown RBP19.28■□□□□ 0.68
TOM1-214ENST00000487670 LGR5O75473 907 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 RPS6P62753 249 aaKnown RBP19.28■□□□□ 0.68
TOM1-214ENST00000487670 PPARAQ07869 468 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 ARHGAP1Q07960 439 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 EPC2Q52LR7 807 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 CCDC62Q6P9F0 684 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 CHST3Q7LGC8 479 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 SESTD1Q86VW0 696 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 CRBNQ96SW2 442 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 GTF2IRD1Q9UHL9 959 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 PLXNA4Q9HCM2 1894 aa19.28■□□□□ 0.68
TOM1-214ENST00000487670 RAD50Q92878 1312 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 NKRFO15226 690 aaKnown RBP eCLIP19.27■□□□□ 0.68
TOM1-214ENST00000487670 HTRA4P83105 476 aaPredicted RBP19.27■□□□□ 0.68
TOM1-214ENST00000487670 COL19A1Q14993 1142 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 SYDE2Q5VT97 1194 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 CCDC155Q8N6L0 562 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 BANK1Q8NDB2 785 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 SP7Q8TDD2 431 aaPredicted RBP19.27■□□□□ 0.68
TOM1-214ENST00000487670 PABPC5Q96DU9 382 aaKnown RBP19.27■□□□□ 0.68
TOM1-214ENST00000487670 ALG1Q9BT22 464 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 KCNH6Q9H252 994 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 GPCPD1Q9NPB8 672 aa19.27■□□□□ 0.68
TOM1-214ENST00000487670 CACNA1HO95180 2353 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 KAT6AQ92794 2004 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 PATL2C9JE40 543 aaKnown RBP19.26■□□□□ 0.67
TOM1-214ENST00000487670 KPNA6O60684 536 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 ZNF286BP0CG31 522 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 BRDTQ58F21 947 aaPredicted RBP19.26■□□□□ 0.67
TOM1-214ENST00000487670 RNF207Q6ZRF8 634 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 RPAINQ86UA6 219 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 ADHFE1Q8IWW8 467 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 TBC1D5Q92609 795 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 ZBTB40Q9NUA8 1239 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 CLDND1Q9NY35 253 aa19.26■□□□□ 0.67
TOM1-214ENST00000487670 ZFHX2Q9C0A1 2572 aaPredicted RBP19.26■□□□□ 0.67
TOM1-214ENST00000487670 CSPG5O95196 566 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 GTF2F1P35269 517 aaKnown RBP eCLIP19.25■□□□□ 0.67
TOM1-214ENST00000487670 PDE4BQ07343 736 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 IKBKEQ14164 716 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 BTNL9Q6UXG8 535 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 DBF4BQ8NFT6 615 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 ALG13Q9NP73 1137 aaKnown RBP19.25■□□□□ 0.67
TOM1-214ENST00000487670 FAM86C1Q9NVL1 165 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 COL20A1Q9P218 1284 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 INSL6Q9Y581 213 aa19.25■□□□□ 0.67
TOM1-214ENST00000487670 LOC102724159A0A0B4J2E5 919 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 TSPY2A6NKD2 308 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 HMMRO75330 724 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 NOVP48745 357 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 PSEN2P49810 448 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 TCF15Q12870 199 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 GPM6BQ13491 265 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 PWP2Q15269 919 aaKnown RBP19.24■□□□□ 0.67
TOM1-214ENST00000487670 TIGD5Q53EQ6 642 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 SEPT14Q6ZU15 432 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 CPVLQ9H3G5 476 aa19.24■□□□□ 0.67
TOM1-214ENST00000487670 H3BNC9 293 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 SORBS3O60504 671 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 GNAT2P19087 354 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 PUS10Q3MIT2 529 aaKnown RBP19.23■□□□□ 0.67
TOM1-214ENST00000487670 RNF135Q8IUD6 432 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 NAPBQ9H115 298 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 ECHDC1Q9NTX5 307 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 PRKAG3Q9UGI9 489 aa19.23■□□□□ 0.67
TOM1-214ENST00000487670 LINC01565O15544 149 aa19.22■□□□□ 0.67
TOM1-214ENST00000487670 MBTPS2O43462 519 aa19.22■□□□□ 0.67
TOM1-214ENST00000487670 TBX10O75333 385 aa19.22■□□□□ 0.67
TOM1-214ENST00000487670 HERC4Q5GLZ8 1057 aaPredicted RBP19.22■□□□□ 0.67
TOM1-214ENST00000487670 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
TOM1-214ENST00000487670 NSUN3Q9H649 340 aaKnown RBP19.22■□□□□ 0.67
TOM1-214ENST00000487670 HAS3O00219 553 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 UPP2O95045 317 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 GH1P01241 217 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 HYAL1Q12794 435 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 PTK7Q13308 1070 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 MFSD10Q14728 455 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 SMAD2Q15796 467 aaKnown RBP19.21■□□□□ 0.67
TOM1-214ENST00000487670 USH1GQ495M9 461 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 TMEM192Q8IY95 271 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 TAAR1Q96RJ0 339 aa19.21■□□□□ 0.67
TOM1-214ENST00000487670 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.2■□□□□ 0.66
TOM1-214ENST00000487670 RANBP6O60518 1105 aaKnown RBP19.2■□□□□ 0.66
TOM1-214ENST00000487670 LINC00271P0C7V0 271 aa19.2■□□□□ 0.66
TOM1-214ENST00000487670 PTPROQ16827 1216 aa19.2■□□□□ 0.66
TOM1-214ENST00000487670 KIAA0753Q2KHM9 967 aa19.2■□□□□ 0.66
TOM1-214ENST00000487670 CTC1Q2NKJ3 1217 aa19.2■□□□□ 0.66
TOM1-214ENST00000487670 VPS53Q5VIR6 699 aa19.2■□□□□ 0.66
TOM1-214ENST00000487670 FBXO11Q86XK2 927 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms