RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 BEX3Q00994 111 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 PTPN11Q06124 597 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 ARHGAP1Q07960 439 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 FAAP100Q0VG06 881 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 GNPTABQ3T906 1256 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 TMEM63BQ5T3F8 832 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 Q6ZUG5 572 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 TDHQ8IZJ6 230 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 INPP4AQ96PE3 977 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 LBHD1Q9BQE6 289 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 GLT8D2Q9H1C3 349 aa11.83□□□□□ -0.52
RNF220-215ENST00000487332 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 DDX41Q9UJV9 622 aaKnown RBP11.83□□□□□ -0.52
RNF220-215ENST00000487332 TRIM43BA6NCK2 446 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
RNF220-215ENST00000487332 RGS20O76081 388 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 MMP3P08254 477 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 FXR1P51114 621 aaKnown RBP eCLIP11.82□□□□□ -0.52
RNF220-215ENST00000487332 FGD1P98174 961 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 PCNX4Q63HM2 1172 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 CXCL17Q6UXB2 119 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 PPTC7Q8NI37 304 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 BRF1Q92994 677 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 TRIM43Q96BQ3 446 aaPredicted RBP11.82□□□□□ -0.52
RNF220-215ENST00000487332 BARHL2Q9NY43 387 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 MRVI1Q9Y6F6 885 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
RNF220-215ENST00000487332 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 FIBPO43427 364 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 CDC27P30260 824 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 AP3B2Q13367 1082 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 LAMC2Q13753 1193 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 WWC2Q6AWC2 1192 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 GPR153Q6NV75 609 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
RNF220-215ENST00000487332 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
RNF220-215ENST00000487332 UBE2OQ9C0C9 1292 aaKnown RBP11.81□□□□□ -0.52
RNF220-215ENST00000487332 ALDH8A1Q9H2A2 487 aaPredicted RBP11.81□□□□□ -0.52
RNF220-215ENST00000487332 PSTPIP2Q9H939 334 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 EHMT1Q9H9B1 1298 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 PRDM5Q9NQX1 630 aaPredicted RBP11.81□□□□□ -0.52
RNF220-215ENST00000487332 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 GRIN2DO15399 1336 aa11.81□□□□□ -0.52
RNF220-215ENST00000487332 STXBP3O00186 592 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 F2P00734 622 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 TIMP1P01033 207 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 CPA1P15085 419 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 UBA1P22314 1058 aaKnown RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 PTGS1P23219 599 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 MRPS9P82933 396 aaKnown RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 TOB2Q14106 344 aaPredicted RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 PFKFB3Q16875 520 aaPredicted RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 LY6KQ17RY6 165 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 CELF3Q5SZQ8 465 aaKnown RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 MCTP2Q6DN12 878 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 USP17L6PQ6QN14 398 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 SH3RF1Q7Z6J0 888 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 RAB11FIP4Q86YS3 637 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 CCDC12Q8WUD4 166 aaPredicted RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 COPS5Q92905 334 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 GPRASP2Q96D09 838 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 ZNF274Q96GC6 653 aaPredicted RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 CDHR1Q96JP9 859 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 RNF26Q9BY78 433 aaPredicted RBP11.8□□□□□ -0.52
RNF220-215ENST00000487332 RIC8AQ9NPQ8 531 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
RNF220-215ENST00000487332 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
RNF220-215ENST00000487332 FOSP01100 380 aaPredicted RBP11.79□□□□□ -0.52
RNF220-215ENST00000487332 MYL3P08590 195 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 MYCLP12524 364 aaPredicted RBP11.79□□□□□ -0.52
RNF220-215ENST00000487332 SCG2P13521 617 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 RAG1P15918 1043 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 IFNAR1P17181 557 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
RNF220-215ENST00000487332 NAPAP54920 295 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 NEDD9Q14511 834 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 NTRK3Q16288 839 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 DGKDQ16760 1214 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
RNF220-215ENST00000487332 MFSD5Q6N075 450 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms