RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ALDH5A1P51649 535 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-209ENST00000487244 ACVR2BQ13705 512 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 LRRC41Q15345 812 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 LRRC26Q2I0M4 334 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 TMEM63BQ5T3F8 832 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
UBE4B-209ENST00000487244 RNF207Q6ZRF8 634 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 EEPD1Q7L9B9 569 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 FBXO11Q86XK2 927 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 MSL3Q8N5Y2 521 aaKnown RBP8.32□□□□□ -1.08
UBE4B-209ENST00000487244 DPF3Q92784 378 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 TMEM87BQ96K49 555 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 JAKMIP1Q96N16 626 aaKnown RBP8.32□□□□□ -1.08
UBE4B-209ENST00000487244 NEK1Q96PY6 1258 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 RIOX1Q9H6W3 641 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 PDGFCQ9NRA1 345 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 NRBP1Q9UHY1 535 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 ABCB11O95342 1321 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 hCG_1642624A0A1W2PR95 340 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 CCDC69A6NI79 296 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 DNM1LO00429 736 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 ZBTB5O15062 677 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 ADAMTS4O75173 837 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 REC8O95072 547 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 RARBP10826 455 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 CLCN1P35523 988 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 ADCYAP1R1P41586 468 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 LIFRP42702 1097 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 APOA5Q6Q788 366 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
UBE4B-209ENST00000487244 SGMS1Q86VZ5 419 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 MICU3Q86XE3 530 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 C7orf61Q8IZ16 206 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 SRBD1Q8N5C6 995 aaKnown RBP8.31□□□□□ -1.08
UBE4B-209ENST00000487244 CTCFLQ8NI51 663 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-209ENST00000487244 MORC4Q8TE76 937 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 FERMT2Q96AC1 680 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 MTA3Q9BTC8 594 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 HTATIP2Q9BUP3 242 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 AMNQ9BXJ7 453 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 SENP6Q9GZR1 1112 aaPredicted RBP8.31□□□□□ -1.08
UBE4B-209ENST00000487244 ABHD16BQ9H3Z7 469 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 PCDHA1Q9Y5I3 950 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 DOCK5Q9H7D0 1870 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
UBE4B-209ENST00000487244 ASB14A6NK59 587 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 CTAGE5O15320 804 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 CFBP00751 764 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 SMPD1P17405 629 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 EDNRBP24530 442 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 HOXA13P31271 388 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-209ENST00000487244 KRT32Q14532 448 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 TAPT1Q6NXT6 567 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 CCDC82Q8N4S0 544 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 SYTL5Q8TDW5 730 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-209ENST00000487244 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 TAAR1Q96RJ0 339 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 MAP3K14Q99558 947 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 SPZ1Q9BXG8 430 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 PNMA2Q9UL42 364 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 FAM184BQ9ULE4 1060 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
UBE4B-209ENST00000487244 PNMA6FA0A0J9YX94 578 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 KLF18A0A0U1RQI7 1052 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 A0A1W2PQ45 241 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 A0A1W2PQY0 241 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 KBTBD13C9JR72 458 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 DUSP11O75319 330 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 C6orf222P0C671 652 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 SYN1P17600 705 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 CAPN2P17655 700 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 CASTP20810 708 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 KIF5BP33176 963 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 HSD17B4P51659 736 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 BEX3Q00994 111 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 TNFAIP2Q03169 654 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 CCSAPQ6IQ19 270 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 BLOC1S3Q6QNY0 202 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 Q6ZUG5 572 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 TMTC3Q6ZXV5 915 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 TMTC2Q8N394 836 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 FANCBQ8NB91 859 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 ARRDC4Q8NCT1 418 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 RGS22Q8NE09 1264 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 IL31RAQ8NI17 732 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 BRF1Q92994 677 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 UPF3AQ9H1J1 476 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 VTA1Q9NP79 307 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 ADD3Q9UEY8 706 aaKnown RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 ZMYND8Q9ULU4 1186 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-209ENST00000487244 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
UBE4B-209ENST00000487244 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms