RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 C16orf59Q7L2K0 433 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 FERMT3Q86UX7 667 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 ANKLE2Q86XL3 938 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 TRMT2BQ96GJ1 504 aaKnown RBP6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 TMEM169Q96HH4 297 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 ORAI3Q9BRQ5 295 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 MARCH2Q9P0N8 246 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 TMEM59LQ9UK28 342 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 RWDD3Q9Y3V2 267 aa6.87□□□□□ -1.31
PRPF38A-203ENST00000487160 CCDC66A2RUB6 948 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 ZNF891A8MT65 544 aaPredicted RBP6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 H7BY64 318 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 FUCA1P04066 466 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 PDGFRBP09619 1106 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 HK2P52789 917 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 PLEKHG6Q3KR16 790 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 HSF5Q4G112 596 aaPredicted RBP6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 TMEM177Q53S58 311 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 NFXL1Q6ZNB6 911 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 OVCH1Q7RTY7 1134 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 DTX1Q86Y01 620 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 KIF18BQ86Y91 864 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 FLCNQ8NFG4 579 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 NLGN2Q8NFZ4 835 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 PI4K2BQ8TCG2 481 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 PLEKHO2Q8TD55 490 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 USP7Q93009 1102 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 CABP5Q9NP86 173 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 CATSPERZQ9NTU4 200 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 CBLCQ9ULV8 474 aa6.86□□□□□ -1.31
PRPF38A-203ENST00000487160 UNC13AQ9UPW8 1703 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 C22orf46C9J442 243 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 GSTA4O15217 222 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 SPINK2P20155 84 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 CD97P48960 835 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 MECP2P51608 486 aaKnown RBP6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 SLC14A2Q15849 920 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 VSIG10LQ86VR7 867 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 CISD2Q8N5K1 135 aaKnown RBP6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 ANKS4BQ8N8V4 417 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 WDR66Q8TBY9 1149 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 USP33Q8TEY7 942 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 ASIC4Q96FT7 647 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 TTC1Q99614 292 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 MTA3Q9BTC8 594 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 TYW1Q9NV66 732 aaKnown RBP6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 IMPACTQ9P2X3 320 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 ADGRE2Q9UHX3 823 aa6.85□□□□□ -1.31
PRPF38A-203ENST00000487160 A0A1W2PQ27 194 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 A0A1W2PQ64 194 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 A0A1W2PQC6 194 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 A0A1W2PQD8 194 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 ALG1L2C9J202 215 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 NEMP1O14524 444 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 BRINP1O60477 761 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 F2P00734 622 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 COL6A2P12110 1019 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 BPIP17213 487 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 FUT4P22083 530 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 ID4P47928 161 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 GUCY2FP51841 1108 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 DSG1Q02413 1049 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 MVKQ03426 396 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 STAT4Q14765 748 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 CRY1Q16526 586 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 BRDTQ58F21 947 aaPredicted RBP6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 OSTM1Q86WC4 334 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 Q8N1Y9 231 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 LZTR1Q8N653 840 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 CHST14Q8NCH0 376 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 PLCD4Q9BRC7 762 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 IRF2BPLQ9H1B7 796 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 IFT22Q9H7X7 185 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 PAK6Q9NQU5 681 aaPredicted RBP6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 FBLN5Q9UBX5 448 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 B4GALT6Q9UBX8 382 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 ZKSCAN5Q9Y2L8 839 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 X6R8D5 127 aa6.84□□□□□ -1.31
PRPF38A-203ENST00000487160 PHLDB1Q86UU1 1377 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 WASHC2CQ9Y4E1 1318 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 NOTOA8MTQ0 251 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 GAS7O60861 476 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 GNAT1P11488 350 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 PDE6AP16499 860 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 PMLP29590 882 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 ERVFC1P60507 584 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 LACTBP83111 547 aaPredicted RBP6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 CHRNEQ04844 493 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 RNF219Q5W0B1 726 aaPredicted RBP6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 GALNT18Q6P9A2 607 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 SLC23A3Q6PIS1 610 aa6.83□□□□□ -1.32
PRPF38A-203ENST00000487160 SPPL2CQ8IUH8 684 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms