RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 NKRFO15226 690 aaKnown RBP eCLIP17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 CFBP00751 764 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 ACRP10323 421 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 CSF2RAP15509 400 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 SMAD3P84022 425 aaKnown RBP17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 STK3Q13188 491 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 PPIGQ13427 754 aaKnown RBP eCLIP17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 BRDTQ58F21 947 aaPredicted RBP17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 ARHGEF16Q5VV41 709 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 SYNE3Q6ZMZ3 975 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 SEPT14Q6ZU15 432 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 SGMS1Q86VZ5 419 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 TMTC2Q8N394 836 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 RMDN3Q96TC7 470 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 MYL10Q9BUA6 226 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.44
SEMA4D-219ENST00000486935 B4GALT4O60513 344 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 PURAQ00577 322 aaKnown RBP17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 TTLL4Q14679 1199 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 GRM4Q14833 912 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 STXBP2Q15833 593 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 C16orf59Q7L2K0 433 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 CATIPQ7Z7H3 387 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 MICU3Q86XE3 530 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 HOMER1Q86YM7 354 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 MTMR8Q96EF0 704 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 GUCD1Q96NT3 240 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 MTG1Q9BT17 334 aaPredicted RBP17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 SEMA6BQ9H3T3 888 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 PCDHA1Q9Y5I3 950 aa17.82■□□□□ 0.44
SEMA4D-219ENST00000486935 ZBTB5O15062 677 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 ZBTB43O43298 467 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 PPP1R11O60927 126 aaPredicted RBP17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 ARIH2O95376 493 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 EIF2AK2P19525 551 aaKnown RBP17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 RXRAP19793 462 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 ME3Q16798 604 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 LY6KQ17RY6 165 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 APOA5Q6Q788 366 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 TMX3Q96JJ7 454 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 ZSCAN31Q96LW9 406 aaPredicted RBP17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 SLKQ9H2G2 1235 aaPredicted RBP17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 COL6A3P12111 3177 aa17.81■□□□□ 0.44
SEMA4D-219ENST00000486935 UMODL1Q5DID0 1318 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 A6NJR5 290 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 GOLGA8AA7E2F4 631 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 KPNA6O60684 536 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 PDIA3P30101 505 aaKnown RBP17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 CCL23P55773 120 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 EVCP57679 992 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 CHMP4BP1P59074 171 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 CCT2P78371 535 aaKnown RBP17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 SLC35G1Q2M3R5 365 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 CCDC62Q6P9F0 684 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 ZNF365Q70YC5 407 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 NECAB1Q8N987 351 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 PPP1R13LQ8WUF5 828 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 PIGSQ96S52 555 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
SEMA4D-219ENST00000486935 LCTP09848 1927 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 OPLAHO14841 1288 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 EIF3JO75822 258 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 DDAH1O94760 285 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 NR3C2P08235 984 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 METAP2P50579 478 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 HSD17B4P51659 736 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 TROAPQ12815 778 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 FAM47CQ5HY64 1035 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 AFG1LQ8WV93 481 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 RIOX1Q9H6W3 641 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 IL23AQ9NPF7 189 aa17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 TRMT13Q9NUP7 481 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-219ENST00000486935 LRRC37A2A6NM11 1700 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CYTH3O43739 400 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 PFKFB2O60825 505 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 SUPT20HL2P0C7V6 817 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CALM1P0DP23 149 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CALM2P0DP24 149 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CALM3P0DP25 149 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CYP2C9P11712 490 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 TRAF1Q13077 416 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 TTYH1Q9H313 450 aaPredicted RBP17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
SEMA4D-219ENST00000486935 PNMA6FA0A0J9YX94 578 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms