RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TEX2Q8IWB9 1127 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 USP6NLQ92738 828 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 FGD4Q96M96 766 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 ANO3Q9BYT9 981 aa14.59□□□□□ -0.07
HDAC6-229ENST00000486665 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
HDAC6-229ENST00000486665 CCDC194A0A1B0GVG4 234 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 SPDYE3A6NKU9 549 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 CYP2B6P20813 491 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 TOB1P50616 345 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-229ENST00000486665 INF2Q27J81 1249 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 ZNF792Q3KQV3 632 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 C7orf61Q8IZ16 206 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 TBCKQ8TEA7 893 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 RMDN3Q96TC7 470 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 PXMP2Q9NR77 195 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 ZMYND8Q9ULU4 1186 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-229ENST00000486665 IVNS1ABPQ9Y6Y0 642 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
HDAC6-229ENST00000486665 WNT7AO00755 349 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 EIF2AK2P19525 551 aaKnown RBP14.57□□□□□ -0.08
HDAC6-229ENST00000486665 NONOQ15233 471 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC6-229ENST00000486665 FOXD4L6Q3SYB3 417 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-229ENST00000486665 MCTP2Q6DN12 878 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-229ENST00000486665 NECAB2Q7Z6G3 386 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 DPP9Q86TI2 863 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 IL31RAQ8NI17 732 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 NPLOC4Q8TAT6 608 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 CRYGNQ8WXF5 182 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 CHAMP1Q96JM3 812 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-229ENST00000486665 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-229ENST00000486665 FRMPD3Q5JV73 1810 aa14.57□□□□□ -0.08
HDAC6-229ENST00000486665 DNAH12Q6ZR08 3092 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 SYN1P17600 705 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 SREBF1P36956 1147 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 ALDH5A1P51649 535 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-229ENST00000486665 ARHGAP4P98171 946 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 MAP2K5Q13163 448 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 NBR1Q14596 966 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 MAP3K21Q5TCX8 1036 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 ARHGEF16Q5VV41 709 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 BRAPQ7Z569 592 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 NSUN6Q8TEA1 469 aaKnown RBP14.56□□□□□ -0.08
HDAC6-229ENST00000486665 GDF15Q99988 308 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 NUDT12Q9BQG2 462 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 PDCD2LQ9BRP1 358 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 HMX1Q9NP08 348 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-229ENST00000486665 FRMPD4Q14CM0 1322 aa14.56□□□□□ -0.08
HDAC6-229ENST00000486665 CYP3A4P08684 503 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 PRKAR2AP13861 404 aaKnown RBP14.55□□□□□ -0.08
HDAC6-229ENST00000486665 PGM5Q15124 567 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 CCL14Q16627 93 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 MYSM1Q5VVJ2 828 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 VSIG10LQ86VR7 867 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 DNERQ8NFT8 737 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 OGDHLQ9ULD0 1010 aa14.55□□□□□ -0.08
HDAC6-229ENST00000486665 A0A0C4DFX4 3053 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 A0A1W2PPC1 479 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 NR3C2P08235 984 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 HOXC6P09630 235 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 MYCLP12524 364 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-229ENST00000486665 EDNRBP24530 442 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 RGS2P41220 211 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 USP11P51784 963 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 MRPS9P82933 396 aaKnown RBP14.54□□□□□ -0.08
HDAC6-229ENST00000486665 ZNF174Q15697 407 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 LETM2Q2VYF4 491 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 NEK8Q86SG6 692 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 ANKLE1Q8NAG6 615 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 CYP2W1Q8TAV3 490 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 IWS1Q96ST2 819 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 EHMT1Q9H9B1 1298 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 RTEL1Q9NZ71 1219 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 FLRT1Q9NZU1 646 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 TFIP11Q9UBB9 837 aaKnown RBP14.54□□□□□ -0.08
HDAC6-229ENST00000486665 ADD3Q9UEY8 706 aaKnown RBP14.54□□□□□ -0.08
HDAC6-229ENST00000486665 DIS3Q9Y2L1 958 aaKnown RBP14.54□□□□□ -0.08
HDAC6-229ENST00000486665 LCTP09848 1927 aa14.54□□□□□ -0.08
HDAC6-229ENST00000486665 TDP2O95551 362 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 CCND3P30281 292 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 DNM1Q05193 864 aaKnown RBP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 CACNB2Q08289 660 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 TTC38Q5R3I4 469 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 PCNX4Q63HM2 1172 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 MORC4Q8TE76 937 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 SOCS4Q8WXH5 440 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 TNPO1Q92973 898 aaKnown RBP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 FTOQ9C0B1 505 aaKnown RBP eCLIP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 C11orf49Q9H6J7 331 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 NOL7Q9UMY1 257 aaKnown RBP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 PCDHB6Q9Y5E3 794 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 CLIC4Q9Y696 253 aa14.53□□□□□ -0.08
HDAC6-229ENST00000486665 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
HDAC6-229ENST00000486665 CYP3A7-CYP3A51PA0A087WV96 503 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 FAM86B1E9PN63 330 aa14.52□□□□□ -0.09
HDAC6-229ENST00000486665 CCNT1O60563 726 aaKnown RBP14.52□□□□□ -0.09
HDAC6-229ENST00000486665 IGHA2P01877 340 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms