RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 RBM28Q9NW13 759 aaKnown RBP12.73□□□□□ -0.37
SNX21-211ENST00000486336 MRVI1Q9Y6F6 885 aa12.73□□□□□ -0.37
SNX21-211ENST00000486336 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
SNX21-211ENST00000486336 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 CASTP20810 708 aaKnown RBP12.72□□□□□ -0.37
SNX21-211ENST00000486336 ITGB8P26012 769 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 GHRHRQ02643 423 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 APOBRQ0VD83 1088 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 HEATR3Q7Z4Q2 680 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 PPP1R13LQ8WUF5 828 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 KCNB2Q92953 911 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 MTG1Q9BT17 334 aaPredicted RBP12.72□□□□□ -0.37
SNX21-211ENST00000486336 PPP1R12CQ9BZL4 782 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
SNX21-211ENST00000486336 GRIN2DO15399 1336 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 KPNA6O60684 536 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 TIMP1P01033 207 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 PURAQ00577 322 aaKnown RBP12.71□□□□□ -0.37
SNX21-211ENST00000486336 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.37
SNX21-211ENST00000486336 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
SNX21-211ENST00000486336 BRF1Q92994 677 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
SNX21-211ENST00000486336 DDX41Q9UJV9 622 aaKnown RBP12.71□□□□□ -0.37
SNX21-211ENST00000486336 V9GY48 417 aaPredicted RBP12.71□□□□□ -0.37
SNX21-211ENST00000486336 A6NJR5 290 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 RPS6KB1P23443 525 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNX21-211ENST00000486336 FPGSQ05932 587 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 ARHGAP1Q07960 439 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 SHHQ15465 462 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 UBE2SQ16763 222 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 NBPF20Q3BBV1 942 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 KCNV1Q6PIU1 500 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 USP26Q9BXU7 913 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
SNX21-211ENST00000486336 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 MEIS2O14770 477 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 B4GALT4O60513 344 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 RGS20O76081 388 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 MMP3P08254 477 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 CDC27P30260 824 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 CYP2C18P33260 490 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 ADD1P35611 737 aaKnown RBP12.69□□□□□ -0.38
SNX21-211ENST00000486336 NAPAP54920 295 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 LAMC2Q13753 1193 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 DGKDQ16760 1214 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 C9orf50Q5SZB4 431 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
SNX21-211ENST00000486336 MLXIPQ9HAP2 919 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 TRMT13Q9NUP7 481 aaKnown RBP12.69□□□□□ -0.38
SNX21-211ENST00000486336 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
SNX21-211ENST00000486336 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 GGPS1O95749 300 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 CD4P01730 458 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
SNX21-211ENST00000486336 SP2Q02086 613 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 GNPTABQ3T906 1256 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 CELF3Q5SZQ8 465 aaKnown RBP12.68□□□□□ -0.38
SNX21-211ENST00000486336 WWC2Q6AWC2 1192 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 MFSD5Q6N075 450 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 TMEM199Q8N511 208 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
SNX21-211ENST00000486336 CYP46A1Q9Y6A2 500 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 KIAA1217Q5T5P2 1943 aa12.68□□□□□ -0.38
SNX21-211ENST00000486336 EPB41L2O43491 1005 aaKnown RBP12.67□□□□□ -0.38
SNX21-211ENST00000486336 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 SUPT20HL2P0C7V6 817 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 ACRP10323 421 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 TGFB3P10600 412 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 CYP2C9P11712 490 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 CSF2RAP15509 400 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 EPHB4P54760 987 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 CCL23P55773 120 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 CCT2P78371 535 aaKnown RBP12.67□□□□□ -0.38
SNX21-211ENST00000486336 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
SNX21-211ENST00000486336 FUT2Q10981 343 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 PPIGQ13427 754 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX21-211ENST00000486336 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
SNX21-211ENST00000486336 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
SNX21-211ENST00000486336 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 LTBP2Q14767 1821 aa12.67□□□□□ -0.38
SNX21-211ENST00000486336 MYH7BA7E2Y1 1941 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms