RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 DSG3P32926 999 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 SOX10P56693 466 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 LONRF3Q496Y0 759 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 FAM160B2Q86V87 743 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 BTBD7Q9P203 1132 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
POLR2J3-204ENST00000486319 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 MB21D1Q8N884 522 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 ZNF333Q96JL9 665 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 DNAJC25Q9H1X3 360 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 PORCNQ9H237 461 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 TMEM260Q9NX78 707 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 ZSWIM8A7E2V4 1837 aa16.51■□□□□ 0.23
POLR2J3-204ENST00000486319 ADCY3O60266 1144 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 NEMFO60524 1076 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 TXLNAP40222 546 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 ZNF165P49910 485 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 IRF5Q13568 498 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 NAT10Q9H0A0 1025 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 TUBE1Q9UJT0 475 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 GJD2Q9UKL4 321 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 USP49Q70CQ1 688 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 CEP57L1Q8IYX8 460 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 CBX8Q9HC52 389 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 FBXO28Q9NVF7 368 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 SERTAD1Q9UHV2 236 aa16.5■□□□□ 0.23
POLR2J3-204ENST00000486319 NLRP12P59046 1061 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 AP3B2Q13367 1082 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 PLS1Q14651 629 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 IL17AQ16552 155 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 UBE2SQ16763 222 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 PDILTQ8N807 584 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 PXYLP1Q8TE99 480 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 ERCC4Q92889 916 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 PDLIM2Q96JY6 352 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 SPATC1LQ9H0A9 340 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 PPP1R9AQ9ULJ8 1098 aa16.49■□□□□ 0.23
POLR2J3-204ENST00000486319 BRCA2P51587 3418 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 ELNP15502 786 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 RGS19P49795 217 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 POSTNQ15063 836 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 PPP4R3AQ6IN85 833 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 IQUBQ8NA54 791 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 AK8Q96MA6 479 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 ADAMTS5Q9UNA0 930 aa16.48■□□□□ 0.23
POLR2J3-204ENST00000486319 SMCHD1A6NHR9 2005 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 VWA5AO00534 786 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 FOSP01100 380 aaPredicted RBP16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 SLFN14P0C7P3 912 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 GCFC2P16383 781 aaKnown RBP16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 UBXN2AP68543 259 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 PNOCQ13519 176 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 DHX58Q96C10 678 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 IVNS1ABPQ9Y6Y0 642 aa16.47■□□□□ 0.23
POLR2J3-204ENST00000486319 MEIS2O14770 477 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 CYP2B6P20813 491 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 SNAP25P60880 206 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 USH1GQ495M9 461 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 LUZP1Q86V48 1076 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 KIFC2Q96AC6 838 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 TRIM44Q96DX7 344 aaPredicted RBP16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 BPIFA3Q9BQP9 254 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 CCSER1Q9C0I3 900 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
POLR2J3-204ENST00000486319 A0A087X0B3 334 aa16.45■□□□□ 0.22
POLR2J3-204ENST00000486319 POTEFA5A3E0 1075 aa16.45■□□□□ 0.22
POLR2J3-204ENST00000486319 GOLGA6L19H0YKK7 550 aa16.45■□□□□ 0.22
POLR2J3-204ENST00000486319 XRCC5P13010 732 aaKnown RBP16.45■□□□□ 0.22
POLR2J3-204ENST00000486319 ERCC3P19447 782 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms