RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 OSBPL1AQ9BXW6 950 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 ZSWIM8A7E2V4 1837 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 BTBD19C9JJ37 291 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 EREGO14944 169 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 TLR2O60603 784 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 CETPP11597 493 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 HIBADHP31937 336 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 CHAF1AQ13111 956 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 CCDC57Q2TAC2 916 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 TMEM102Q8N9M5 508 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 TDRD7Q8NHU6 1098 aaKnown RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 GIMAP7Q8NHV1 300 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 FBLIM1Q8WUP2 373 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 BSNDQ8WZ55 320 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 ZKSCAN4Q969J2 545 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 SHISA4Q96DD7 197 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 FAM84BQ96KN1 310 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 WRNIP1Q96S55 665 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 PRKRIP1Q9H875 184 aaPredicted RBP8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 CPA4Q9UI42 421 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 SNCAIPQ9Y6H5 919 aa8.12□□□□□ -1.11
TMEM39A-209ENST00000486235 MPSTP25325 297 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 CTGFP29279 349 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 USP11P51784 963 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 SNAPC2Q13487 334 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 ERO1BQ86YB8 467 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 HELQQ8TDG4 1101 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 TMPRSS13Q9BYE2 586 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 PUS3Q9BZE2 481 aaKnown RBP8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 A0A1B0GUL6 1792 aa8.11□□□□□ -1.11
TMEM39A-209ENST00000486235 LOC100289279A0A1B0GTE1 492 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 FAM95CA0A1B0GW59 222 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 FRAT2O75474 233 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 MZF1P28698 734 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 PSMC4P43686 418 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 EIF1AXP47813 144 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 PDE4CQ08493 712 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 PPIL2Q13356 520 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 MTMR3Q13615 1198 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 BEND3Q5T5X7 828 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 MIGA2Q7L4E1 593 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 SMG8Q8ND04 991 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 RAET1EQ8TD07 263 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 CYP4F12Q9HCS2 524 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 TMOD2Q9NZR1 351 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 BIN2Q9UBW5 565 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 SRRDQ9UH36 339 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 POLIQ9UNA4 740 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 BRCA2P51587 3418 aa8.1□□□□□ -1.11
TMEM39A-209ENST00000486235 MYPNQ86TC9 1320 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 FANCIQ9NVI1 1328 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 GRM8O00222 908 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 TIAF1O95411 115 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 CCL5P13501 91 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 FOSL1P15407 271 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 GRK4P32298 578 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 PRMT2P55345 433 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 AAMPQ13685 434 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 PAOXQ6QHF9 649 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 C17orf99Q6UX52 265 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 TEKT1Q969V4 418 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 GZF1Q9H116 711 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 ZCCHC17Q9NP64 241 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 LATS2Q9NRM7 1088 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 C9orf78Q9NZ63 289 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 MTMR7Q9Y216 660 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 RIPOR2Q9Y4F9 1068 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 CENPFP49454 3210 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 ARAP2Q8WZ64 1704 aa8.09□□□□□ -1.11
TMEM39A-209ENST00000486235 PDHXO00330 501 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 PHACTR2O75167 634 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 VAMP4O75379 141 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 FARP2O94887 1054 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 GJB1P08034 283 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 HOXD10P28358 340 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 ADMP35318 185 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 GJA8P48165 433 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 GSTM4Q03013 218 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 PRKCZQ05513 592 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 EXOSC9Q06265 439 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 CCDC27Q2M243 656 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 CCDC184Q52MB2 194 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 DCAF15Q66K64 600 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 APOBEC3HQ6NTF7 200 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 SLC4A10Q6U841 1118 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 RETREG2Q8NC44 543 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 SLC17A8Q8NDX2 589 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 GTF3C2Q8WUA4 911 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 SUCLG2Q96I99 432 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms