RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 NEFLP07196 543 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 SUPT20HL2P0C7V6 817 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 KRT32Q14532 448 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 NBPF20Q3BBV1 942 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 FAM109BQ6ICB4 259 aaPredicted RBP21.27■■□□□ 1
PRPF40A-209ENST00000486100 KCNV1Q6PIU1 500 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 SYNE3Q6ZMZ3 975 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 Q7L0L9 218 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 HIPK3Q9H422 1215 aa21.27■■□□□ 1
PRPF40A-209ENST00000486100 CSF2RAP15509 400 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 CCND2P30279 289 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 CYP2C18P33260 490 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 LAMC2Q13753 1193 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 ADCK5Q3MIX3 580 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 NFRKBQ6P4R8 1299 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 C16orf59Q7L2K0 433 aa21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 CMTR1Q8N1G2 835 aaKnown RBP21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 EMID1Q96A84 441 aaPredicted RBP21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 RNPC3Q96LT9 517 aaKnown RBP21.26■□□□□ 0.99
PRPF40A-209ENST00000486100 MMP3P08254 477 aa21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 CASTP20810 708 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 SMAD3P84022 425 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 IL31RAQ8NI17 732 aa21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.25■□□□□ 0.992e-14■□□□□ 11.2
PRPF40A-209ENST00000486100 NOC4LQ9BVI4 516 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 TRMT13Q9NUP7 481 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 MTMR10Q9NXD2 777 aa21.25■□□□□ 0.99
PRPF40A-209ENST00000486100 PIK3CDO00329 1044 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 HMGB1P09429 215 aaKnown RBP21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 TGFB3P10600 412 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 PTPN11Q06124 597 aaPredicted RBP21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 DGKDQ16760 1214 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 TMEM240Q5SV17 173 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 APOA5Q6Q788 366 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 TMTC3Q6ZXV5 915 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 MICU3Q86XE3 530 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 DHX37Q8IY37 1157 aaKnown RBP21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 CCDC82Q8N4S0 544 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 KCNB2Q92953 911 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 CUL5Q93034 780 aa21.24■□□□□ 0.99
PRPF40A-209ENST00000486100 MEIS2O14770 477 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 FAM47CQ5HY64 1035 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 USP17L6PQ6QN14 398 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 SMARCC2Q8TAQ2 1214 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 TCEANC2Q96MN5 208 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 FRMPD4Q14CM0 1322 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 UMODL1Q5DID0 1318 aa21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 BAZ2BQ9UIF8 2168 aaKnown RBP21.23■□□□□ 0.99
PRPF40A-209ENST00000486100 MYH6P13533 1939 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 STAM2O75886 525 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 ACRP10323 421 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 CYP2C9P11712 490 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 HSPA4P34932 840 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 CCL23P55773 120 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 CELF3Q5SZQ8 465 aaKnown RBP21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 MYSM1Q5VVJ2 828 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 ZNF365Q70YC5 407 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 PPTC7Q8NI37 304 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 KAT2BQ92831 832 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 ZFP91Q96JP5 570 aaPredicted RBP21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 IL23AQ9NPF7 189 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 RBM28Q9NW13 759 aaKnown RBP21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 BRPF3Q9ULD4 1205 aa21.22■□□□□ 0.99
PRPF40A-209ENST00000486100 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 MRPS9P82933 396 aaKnown RBP21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 SP2Q02086 613 aa21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 PSRC1Q6PGN9 363 aaPredicted RBP21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 PPP1R13LQ8WUF5 828 aa21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 PSTPIP2Q9H939 334 aa21.21■□□□□ 0.99
PRPF40A-209ENST00000486100 hCG_1642624A0A1W2PR95 340 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 ZBTB43O43298 467 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 PPFIA4O75335 1185 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 GGPS1O95749 300 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 CHMP4BP1P59074 171 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 GNPTABQ3T906 1256 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 ZNF697Q5TEC3 545 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 RASIP1Q5U651 963 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 XRRA1Q6P2D8 792 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 SESTD1Q86VW0 696 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 RPUSD2Q8IZ73 545 aaKnown RBP21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 GPKOWQ92917 476 aaPredicted RBP eCLIP21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 INPP4AQ96PE3 977 aaPredicted RBP21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 WNT8AQ9H1J5 351 aa21.2■□□□□ 0.98
PRPF40A-209ENST00000486100 REC8O95072 547 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 FGBP02675 491 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 HOXD8P13378 290 aaPredicted RBP21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 UBA1P22314 1058 aaKnown RBP21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 ICAM3P32942 547 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 RTN1Q16799 776 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 SPATA33Q96N06 139 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 MLXIPQ9HAP2 919 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 RTEL1Q9NZ71 1219 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 SNX14Q9Y5W7 946 aa21.19■□□□□ 0.98
PRPF40A-209ENST00000486100 KLF18A0A0U1RQI7 1052 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 SPATA31C2B4DYI2 1134 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 RCAN1P53805 252 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 FGD1P98174 961 aa21.18■□□□□ 0.98
PRPF40A-209ENST00000486100 HSDL1Q3SXM5 330 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms