RNA–Protein interactions for RNA: ENST00000486022.1

LSMEM1-205, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-205ENST00000486022 SPATA6Q9NWH7 488 aaPredicted RBP6.28□□□□□ -1.4
LSMEM1-205ENST00000486022 BTG4Q9NY30 223 aa6.28□□□□□ -1.4
LSMEM1-205ENST00000486022 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.28□□□□□ -1.4
LSMEM1-205ENST00000486022 MARCH2Q9P0N8 246 aa6.28□□□□□ -1.4
LSMEM1-205ENST00000486022 TMEFF2Q9UIK5 374 aaPredicted RBP6.28□□□□□ -1.4
LSMEM1-205ENST00000486022 FHAD1B1AJZ9 1412 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 SF1Q15637 639 aaKnown RBP6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 FRMD5Q7Z6J6 570 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 TEX2Q8IWB9 1127 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 NPLOC4Q8TAT6 608 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 MICAL1Q8TDZ2 1067 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 DDX11Q96FC9 970 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 STRIP2Q9ULQ0 834 aa6.27□□□□□ -1.41
LSMEM1-205ENST00000486022 ERICH3Q5RHP9 1530 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 CLASP1Q7Z460 1538 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 TRBV23OR9-2A0A075B6M9 112 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 SH3D21A4FU49 640 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 NOP56O00567 594 aaKnown RBP6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 SGSM2O43147 1006 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 ETFBP38117 255 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 CACNB2Q08289 660 aaPredicted RBP6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 SLC9A5Q14940 896 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 RTP5Q14D33 572 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 NCAPHQ15003 741 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 NT5DC1Q5TFE4 455 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 POMZP3Q6PJE2 187 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 CCDC103Q8IW40 242 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 FAM26EQ8N5C1 309 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 TEPSINQ96N21 525 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 NKX2-4Q9H2Z4 354 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 NUDT5Q9UKK9 219 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 GRIN2AQ12879 1464 aa6.26□□□□□ -1.41
LSMEM1-205ENST00000486022 ZBTB7AO95365 584 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 ITGAVP06756 1048 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 FPR2P25090 351 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 ZNF143P52747 638 aaPredicted RBP6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 SMAD4Q13485 552 aaKnown RBP6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 LARP1BQ659C4 914 aaKnown RBP6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 FERMT3Q86UX7 667 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 FAM178BQ8IXR5 827 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 CPA5Q8WXQ8 436 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 DUSP10Q9Y6W6 482 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 ARAP1Q96P48 1450 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 KIF27Q86VH2 1401 aa6.25□□□□□ -1.41
LSMEM1-205ENST00000486022 C22orf46C9J442 243 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 C8BP07358 591 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 CELA3BP08861 270 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 ERCC5P28715 1186 aaPredicted RBP6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 ECI1P42126 302 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 PRSS53Q2L4Q9 553 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 SV2CQ496J9 727 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 MRM1Q6IN84 353 aaKnown RBP6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 STK32CQ86UX6 486 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 CARFQ8N187 725 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 CRACR2BQ8N4Y2 399 aaPredicted RBP6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 DDX1Q92499 740 aaKnown RBP6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 ZBTB8AQ96BR9 441 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 CAPN10Q9HC96 672 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 ACTR10Q9NZ32 417 aa6.24□□□□□ -1.41
LSMEM1-205ENST00000486022 ADAMTS12P58397 1594 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 NOBOXO60393 691 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 DENND5AQ6IQ26 1287 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 PRRT2Q7Z6L0 340 aaPredicted RBP6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 ZNF227Q86WZ6 799 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 KREMEN2Q8NCW0 462 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 GORASP1Q9BQQ3 440 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 BDH2Q9BUT1 245 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 FBXL7Q9UJT9 491 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 NUP160Q12769 1436 aa6.23□□□□□ -1.41
LSMEM1-205ENST00000486022 DDAH1O94760 285 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 SSBP05455 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 NAT2P11245 290 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 LCP1P13796 627 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 BCL6P41182 706 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 NFKB2Q00653 900 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 PLP2Q04941 152 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 CEP68Q76N32 757 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 NLRP10Q86W26 655 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 RCBTB1Q8NDN9 531 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 ZNF428Q96B54 188 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 USP40Q9NVE5 1235 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 LRP2BPQ9P2M1 347 aa6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
LSMEM1-205ENST00000486022 SUSD5O60279 629 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 SNRPB2P08579 225 aaKnown RBP6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 HOXC12P31275 282 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 SARSP49591 514 aaKnown RBP6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 ZFYVE27Q5T4F4 411 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 CD300LDQ6UXZ3 194 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 VPS37DQ86XT2 251 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 PRKAG3Q9UGI9 489 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 PALD1Q9ULE6 856 aa6.21□□□□□ -1.42
LSMEM1-205ENST00000486022 CEP170Q5SW79 1584 aa6.2□□□□□ -1.42
LSMEM1-205ENST00000486022 CYP2C8P10632 490 aa6.2□□□□□ -1.42
LSMEM1-205ENST00000486022 GRIA2P42262 883 aa6.2□□□□□ -1.42
LSMEM1-205ENST00000486022 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms