RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 LDHAL6AQ6ZMR3 332 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 ATCAYQ86WG3 371 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 CEP120Q8N960 986 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 MYH16Q9H6N6 1097 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 CNNM1Q9NRU3 951 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 TMEM63CQ9P1W3 806 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 AGTPBP1Q9UPW5 1226 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 AFG3L2Q9Y4W6 797 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 ZHX2Q9Y6X8 837 aa8.32□□□□□ -1.08
SMC4-217ENST00000485867 TCF20Q9UGU0 1960 aaKnown RBP8.31□□□□□ -1.08
SMC4-217ENST00000485867 MAST3O60307 1309 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 DNAH12Q6ZR08 3092 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 WISP1O95388 367 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 CDC27P30260 824 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 GNAI1P63096 354 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 SMAD3P84022 425 aaKnown RBP8.31□□□□□ -1.08
SMC4-217ENST00000485867 NFIAQ12857 509 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 C9orf50Q5SZB4 431 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 HHIPL2Q6UWX4 724 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 G2E3Q7L622 706 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 FBXO33Q7Z6M2 555 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 TSPYL6Q8N831 410 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 PBX4Q9BYU1 374 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 KCNK4Q9NYG8 393 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 MYH2Q9UKX2 1941 aa8.31□□□□□ -1.08
SMC4-217ENST00000485867 SYNGAP1Q96PV0 1343 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 GLB1P16278 677 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 FSTP19883 344 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 CD68P34810 354 aaPredicted RBP8.3□□□□□ -1.08
SMC4-217ENST00000485867 CCDC57Q2TAC2 916 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 TAF7LQ5H9L4 462 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 EPHA10Q5JZY3 1008 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 TREML2Q5T2D2 321 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 LMBR1LQ6UX01 489 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 UBL7Q96S82 380 aaPredicted RBP8.3□□□□□ -1.08
SMC4-217ENST00000485867 STK31Q9BXU1 1019 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 SUGT1Q9Y2Z0 365 aa8.3□□□□□ -1.08
SMC4-217ENST00000485867 TRIM75PA6NK02 468 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 CYP2B6P20813 491 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 EPHA1P21709 976 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 CCND3P30281 292 aaPredicted RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 GCLCP48506 637 aaPredicted RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 CACNB2Q08289 660 aaPredicted RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 CDC42EP5Q6NZY7 148 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 ZNF438Q7Z4V0 828 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 NCAPG2Q86XI2 1143 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 DNAAF4Q8WXU2 420 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 POP1Q99575 1024 aaKnown RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 DAGLAQ9Y4D2 1042 aa8.29□□□□□ -1.08
SMC4-217ENST00000485867 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
SMC4-217ENST00000485867 FSCN2O14926 492 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 ZKSCAN1P17029 563 aaPredicted RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 RTP1P59025 263 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 XKR5Q6UX68 686 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 CCDC84Q86UT8 332 aaPredicted RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 ZFPM1Q8IX07 1006 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 ATXN2LQ8WWM7 1075 aaKnown RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 PUS3Q9BZE2 481 aaKnown RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 SENP6Q9GZR1 1112 aaPredicted RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 ADAM19Q9H013 955 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
SMC4-217ENST00000485867 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 MORF4L1Q9UBU8 362 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 PLXNA1Q9UIW2 1896 aa8.28□□□□□ -1.08
SMC4-217ENST00000485867 RFX7Q2KHR2 1363 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
SMC4-217ENST00000485867 RPLP1P05386 114 aaKnown RBP8.27□□□□□ -1.09
SMC4-217ENST00000485867 CDC25BP30305 580 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 CALD1Q05682 793 aaKnown RBP8.27□□□□□ -1.09
SMC4-217ENST00000485867 CAVIN4Q5BKX8 364 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 KIAA1211Q6ZU35 1233 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 ACAD11Q709F0 780 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 SOCS4Q8WXH5 440 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 EDEM1Q92611 657 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 ASB2Q96Q27 587 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 UHRF1Q96T88 793 aaPredicted RBP8.27□□□□□ -1.09
SMC4-217ENST00000485867 ASCC2Q9H1I8 757 aaPredicted RBP8.27□□□□□ -1.09
SMC4-217ENST00000485867 THEGQ9P2T0 379 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 MROH5Q6ZUA9 1318 aa8.27□□□□□ -1.09
SMC4-217ENST00000485867 CTNND1O60716 968 aaKnown RBP8.26□□□□□ -1.09
SMC4-217ENST00000485867 ADAM11O75078 769 aa8.26□□□□□ -1.09
SMC4-217ENST00000485867 PDGFAP04085 211 aa8.26□□□□□ -1.09
SMC4-217ENST00000485867 CCL14Q16627 93 aa8.26□□□□□ -1.09
SMC4-217ENST00000485867 ARMC10Q8N2F6 343 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms